Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1781 |
Symbol | |
ID | 8882971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1866571 |
End bp | 1868037 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | putative phytochrome sensor protein |
Protein accession | YP_003510571 |
Protein GI | 291299293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAG ATCCCCTCGC CCACACCCTC GTCCCCGACC CCGTGGCCTA CGCCCGGCGC ATGCGGCGGC TGCGCGACGA CATGCTCGCC GGGACAGTCT CGGGTGACGC GCCCCGGGAC CTGATCACGG CCTCATGGCG GCGCAGCCTG ACCGCTCGGG TCGATCCGGA CGCCGACGGG CCGGTGGTGG TGTACGCCGA CGGCGCCGTC GACTACCGGC GGGAACATCC GCTGGCGGCG TGTCTGCCGC TGCTGCGGCA CACGTTGCTG TCCATCGCCG AGGAGGCGAT GCACGTCATG ATCGTCACCG ACGCGGACGG GACGATGCTG TGGCGGGAGG GGCACGCGTC GGTGCAGTTG CGGGCCGACC GGGTGGGGTT GAGCCCGGGC ACCTCGTGGG CGGAGGCGTC GATCGGCACC AACGCCATGG GCACGACGCT GGCCATCGAC CGGCCGGTGC AGATCTACTC GGCCGAGCAC CTGGTCAGCA CGTATCACGA CTGGACCTGC GCGGCGGCTC CGGTGCACGA CCCCGACACC GGCGAGATCC TTGGCGCCGT GGACATCTCG GGGCCGCTGC ACACGATCCA CCCGGCGACG GTGGCGCTGG TGTCGGCGGC GGCGCGGCTG GCCGAGTCCC GGCTGGCCGA ACTGGCCGAC GAGCGGGACC GCCGGTTCGC GCGGCGGCAC CAGTCGCGGC TGGGCGACCG TCCCGGGGCG CTGTTGACGG CCACCGGCCG GGTGCTGGCG GCCACCGCCA CCGGGCTGCC CGAGCGCGTC GATCCCGGCG AGTCCCGGCT GGGTGGGCGC CGGGTGTGGG TGGAGCCGCT GGACGAGGGC TATCTGCTGC GGCTGGAGAA CGGTCCGGTG ACGCGGACGG CGGCCTCACC CCGGTTGCGG CTGCGGGTGC TGGGTGAGGA GCAGCCGACG GTGGAGGTGG CCGGGCGGGT GCTGCCGCTG CCGCGTCGGC ACGCCGAGAT CCTGACGGTG CTGGCGATGC ACCCGGCCGG ACTGACGGCG GGACAGCTGG CCTTCCACCT GTACGGCGAC GACGGGAACC CGGTGACGGT GCGCACCGAG ATCCACCGGC TGCGCGCGCA TCTGGGGCAG CGGGTGCTGG TCACCAAGCC GTACCGGCTG GCCGCCGACG CGGACGTGGA CTTCCTGACC GTGGACCGGT CGCTGCGGCA CGGTGACGTC GGCGCCGCGG TGGCGAGCTT CCGGGGCGGG CTGTTGCCGT ACTCGGAGGC GCCCGCCATC CGCGCCGCCC GGGAGGAGCA GCTGGCCGCG CTGCGCGGCG CGGTGCTGGC ACGTCCGGAC GTCGATCTGT TGTGGAGTGT CATCCGGTTC CCGCCGTGTG ACGGGGATCT GGGGCTGTTG GAGGCGTTGT GCGAGCACAC GCCGCGCAGC GACGCCCGGC ACCACTGGGC GCTGGCCCGG CTGGCGGCCG TCGACGACGG GGACTGA
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Protein sequence | MSRDPLAHTL VPDPVAYARR MRRLRDDMLA GTVSGDAPRD LITASWRRSL TARVDPDADG PVVVYADGAV DYRREHPLAA CLPLLRHTLL SIAEEAMHVM IVTDADGTML WREGHASVQL RADRVGLSPG TSWAEASIGT NAMGTTLAID RPVQIYSAEH LVSTYHDWTC AAAPVHDPDT GEILGAVDIS GPLHTIHPAT VALVSAAARL AESRLAELAD ERDRRFARRH QSRLGDRPGA LLTATGRVLA ATATGLPERV DPGESRLGGR RVWVEPLDEG YLLRLENGPV TRTAASPRLR LRVLGEEQPT VEVAGRVLPL PRRHAEILTV LAMHPAGLTA GQLAFHLYGD DGNPVTVRTE IHRLRAHLGQ RVLVTKPYRL AADADVDFLT VDRSLRHGDV GAAVASFRGG LLPYSEAPAI RAAREEQLAA LRGAVLARPD VDLLWSVIRF PPCDGDLGLL EALCEHTPRS DARHHWALAR LAAVDDGD
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