Gene Snas_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1740 
Symbol 
ID8882930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1826959 
End bp1827645 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003510531 
Protein GI291299253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CGATCTCGGT GCTCGTCGTC GACGACCAGT CGCTGCTGCG CGGCAGCTTC 
ACCCTCCTCA TCGACACCGA GGACGACCTG CGCGTCGTCG GCGAGGCCGG AACCGGGGTG
GAGGCGGTGG ACGCGGCCCG GCGGCTGCTG CCCGACGTCG TGCTCATGGA CGTGCGGATG
CCCGACATGA ACGGCATCGA GGCCACCCGC CGCATCTGCG GCGACCCCGC GCTTTCCGGA
GTGCGGGTCC TGATGCTCAC CACCTTCGAC CTCGACGAAT ACGTCTACTC CAGCTTGCGC
GCCGGCGCCA GCGGCTTCCT GCTAAAGGAC GTCCCGCCCA CGCAACTGCT GCACGCCATC
CGGGTGGTCG CCAACGGCGA GAGCCTGCTG GCGCCCAGCG TCACCCGGCG GCTGGTGGCC
GAGTTCGTCG CCCGCCCACA CGAGTCCACG GTGGCCAGCA CCGACCTGGC CGCCGTGACC
GAACGGGAGC GCGAGGTCCT GACCCTGGTC GCCAGGGGAC TGTCCAATAC CGAGATCGCC
GAGCGGCTGC ACCTGAGCCT GGCCACCGTC AAGACCCACA TCGGGCACCT GCTGCGCAAA
CTGACGGCCC GGGACCGGGC GCAACTGGTG ATCGCCGCCT ACGAGTCCGG GCTGGTCACC
GCGAGCGCCC CGCGCGGCTC GCGGTAA
 
Protein sequence
MTEPISVLVV DDQSLLRGSF TLLIDTEDDL RVVGEAGTGV EAVDAARRLL PDVVLMDVRM 
PDMNGIEATR RICGDPALSG VRVLMLTTFD LDEYVYSSLR AGASGFLLKD VPPTQLLHAI
RVVANGESLL APSVTRRLVA EFVARPHEST VASTDLAAVT EREREVLTLV ARGLSNTEIA
ERLHLSLATV KTHIGHLLRK LTARDRAQLV IAAYESGLVT ASAPRGSR