Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1740 |
Symbol | |
ID | 8882930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1826959 |
End bp | 1827645 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003510531 |
Protein GI | 291299253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAC CGATCTCGGT GCTCGTCGTC GACGACCAGT CGCTGCTGCG CGGCAGCTTC ACCCTCCTCA TCGACACCGA GGACGACCTG CGCGTCGTCG GCGAGGCCGG AACCGGGGTG GAGGCGGTGG ACGCGGCCCG GCGGCTGCTG CCCGACGTCG TGCTCATGGA CGTGCGGATG CCCGACATGA ACGGCATCGA GGCCACCCGC CGCATCTGCG GCGACCCCGC GCTTTCCGGA GTGCGGGTCC TGATGCTCAC CACCTTCGAC CTCGACGAAT ACGTCTACTC CAGCTTGCGC GCCGGCGCCA GCGGCTTCCT GCTAAAGGAC GTCCCGCCCA CGCAACTGCT GCACGCCATC CGGGTGGTCG CCAACGGCGA GAGCCTGCTG GCGCCCAGCG TCACCCGGCG GCTGGTGGCC GAGTTCGTCG CCCGCCCACA CGAGTCCACG GTGGCCAGCA CCGACCTGGC CGCCGTGACC GAACGGGAGC GCGAGGTCCT GACCCTGGTC GCCAGGGGAC TGTCCAATAC CGAGATCGCC GAGCGGCTGC ACCTGAGCCT GGCCACCGTC AAGACCCACA TCGGGCACCT GCTGCGCAAA CTGACGGCCC GGGACCGGGC GCAACTGGTG ATCGCCGCCT ACGAGTCCGG GCTGGTCACC GCGAGCGCCC CGCGCGGCTC GCGGTAA
|
Protein sequence | MTEPISVLVV DDQSLLRGSF TLLIDTEDDL RVVGEAGTGV EAVDAARRLL PDVVLMDVRM PDMNGIEATR RICGDPALSG VRVLMLTTFD LDEYVYSSLR AGASGFLLKD VPPTQLLHAI RVVANGESLL APSVTRRLVA EFVARPHEST VASTDLAAVT EREREVLTLV ARGLSNTEIA ERLHLSLATV KTHIGHLLRK LTARDRAQLV IAAYESGLVT ASAPRGSR
|
| |