| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1677 |
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| Symbol | |
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| ID | 8882867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1769544 |
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| End bp | 1770200 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003510470 |
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| Protein GI | 291299192 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000521041 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.168881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCTGA ACAGTGTTAA GCTGTCAACC GTGTCGCTGA GCAGGGAAAA ACTGGTGTCC
GTCGGACTGG AGCTGCTGGA CGAGCACGGC CTGGAGGGCC TGTCGTTGCG CAAACTGGCC
ACCGAGCTCG ACGTCCAGGC CTCGGCCATC TACTGGCACT TCAAGAACAA GCAGGAACTG
CTGGACGAGA TGGCCACCGC CATGTTCCGG CGGTTGTTGA CCGACACGGA ATGGCCGCAA
CCGCGCGACT GGCGCGACGG CCTGGAACGC CTGGGCGTGG AACTGCGCGC CATGCTGCTG
TCACGCCGCG ACGGCGCCAA GATGGCCGCC GGAACCTACC TCACCGACGA CTCGCTGCTG
AGCTCCATGG AGATCCCGCT GCGGTTCCTC ACCGAGGCGG GTTTCCCACT GCGCGACGCG
GTGCGGGCGT TCATCACCGT CTACAGCTTC ACCGTGGGCT TCACGATCGA GGAACAGGCC
GTCGCGGGCG ACCCGCGCTA CGCCGACACC GCCCGCCGAA GCCGCATCGA CGCCGAGAAG
TACCCGCTTT CCGCCTCGGC GGGGCCGGAG ATCTTCGGCA CCCCCGACGA ACGCTTCGAA
CACGGCCTGC GGGTGATCAT CGCAGGGGTC GGCGCCTACG CCTCCGAACC GAGGTAG
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| Protein sequence | MCLNSVKLST VSLSREKLVS VGLELLDEHG LEGLSLRKLA TELDVQASAI YWHFKNKQEL
LDEMATAMFR RLLTDTEWPQ PRDWRDGLER LGVELRAMLL SRRDGAKMAA GTYLTDDSLL
SSMEIPLRFL TEAGFPLRDA VRAFITVYSF TVGFTIEEQA VAGDPRYADT ARRSRIDAEK
YPLSASAGPE IFGTPDERFE HGLRVIIAGV GAYASEPR
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