Gene Snas_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1621 
Symbol 
ID8882811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1712598 
End bp1713686 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content74% 
IMG OID 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003510417 
Protein GI291299139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0115166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000158082 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACACGC CGATCGTGAC CGCGCTGTAC GCACCGGCCA GCAGACCGGA ACTGTTGCCC 
AAGGCCATGG CGAGCGGGGC CGACGCGGTG ATCGTGGACC TGGAGGACGC GGTGCTGGCC
GGGCGCAAGG AGGAGGCGCG CGCGAACGTG CTGGCGTTCC TGGACGGCTT GGCCGAGGCC
GACGCGGGTC CGAGCGGCTC GGCTGAGCTT GGCGAACGGG GCACGTCGGC TGACGGCAGC
CCAAGCGGCT CGGCCGAGCC GAGCGAGCGG AGCTCGTCGG CGGGGGAGCG GGGCGAGGGC
CCGGCGGAGT CCGCTGTGGA GCGGGTGCCG ACGATTCCGG TGCAGCGCGG GCGATCGGGC
GGTTCGCGCG AGCGTGGAGC CGAGGCCGGG GCGCGGCGGT CGGGGCCGCA CTGTCGGCCG
GTGGTTCAGG TCCGGGTCAA CCATCCGCGC GGTGAGTTCG GCCCGCGTGA CCTGGCCGCG
TTGGGGGCGC ATCCCGTGGT GCGGGCCGGG CGGGTCGCGG TGCGGTTGCC GAAGGTCGCC
GGGCCGCAGG ACGTCGATCT GGCGCTCGAC ATGCTTAATG TGGACGCGCC GCTGGCGGTC
CACTGCCTGC TAGAGTCCGC GATCGGTGTT GAGTACGCGC GTGACATCGC CGCCCACCCG
GCCGTGGCCG GGCTCGCGCT CGGGGAGGCC GACCTGGCCG CCGAGCTGGG TCTGCGCGGC
GAGGAGTCCT TCGGCTGGAT CCGCAGCCGC ATCGTCATCG CCGCCGTCGC CGCGGGCCTA
CCGGCCCCCG CGATGGCGGT CTACACCGAT CTGGCCGACC CACGGGGTCT GGCCGAGTCG
TGTGCGCGGG GCCGGGCGCT CGGCATGTTC GGTCGCACCG CCCTGCACCC CAAACAGCTG
TCGACGATCA CCGCCGCGTT CGCCCCCGAC GGGGTCGAAC TGCGTCGCGC CCACGAGGTG
GTGACCGCGG CAGCTGGTGC CGAGGCCGAC GGGAGCGGCG CGATCGCCCT GCCCGACGGA
CGGTTCATCG ACGCACCCAT GGTCGAGTCC GCCAAACGCA CCATCCAGCT CGCGGAACGG
CTCGGTTGA
 
Protein sequence
MDTPIVTALY APASRPELLP KAMASGADAV IVDLEDAVLA GRKEEARANV LAFLDGLAEA 
DAGPSGSAEL GERGTSADGS PSGSAEPSER SSSAGERGEG PAESAVERVP TIPVQRGRSG
GSRERGAEAG ARRSGPHCRP VVQVRVNHPR GEFGPRDLAA LGAHPVVRAG RVAVRLPKVA
GPQDVDLALD MLNVDAPLAV HCLLESAIGV EYARDIAAHP AVAGLALGEA DLAAELGLRG
EESFGWIRSR IVIAAVAAGL PAPAMAVYTD LADPRGLAES CARGRALGMF GRTALHPKQL
STITAAFAPD GVELRRAHEV VTAAAGAEAD GSGAIALPDG RFIDAPMVES AKRTIQLAER
LG