| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1503 |
|---|
| Symbol | |
|---|
| ID | 8882691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1586788 |
|---|
| End bp | 1588647 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative aminoacid/polyamine transporter, permease protein |
|---|
| Protein accession | YP_003510300 |
|---|
| Protein GI | 291299022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACCA CACCCCTCAA GCTCCATCCC GCCCCCGAGC ACGACGAACC CGAGCCCCGG
CGAAAGTACA GCCCACCCGC CGGGGCGGCC GCGCGCGACG ACAAGCACCG GCTGACCGTC
TGCGGCGGGC TGGCCGCGCT GTCGTTGGAC GCCATGGCAT CCGTCGCCTA CGGTCCCGAG
GCGATCGTGC TGGTGCTGGC CGCCGCCGGG GCCTACGGAC TCGGGTTCAC GCTGCCGGTG
ACGATCGCCA TCGCCGTCCT GCTGGCCGTG CTGGTGTTCT CCTACCGGCA GGTCATCGCC
GCGTTCCCCG GCGGCGGGGG CGCCTACGGG GTGGCCAAGG CCCGGCTGGG CAAGCACGCC
GGTCTGACCG CCGCCGCCTC GCTGGTCCTC GACTACGTCC TCAACGTCGC CGTGTCCGTG
GCCGCGGGCG TGGCGGCGCT GACCGCGGCC GTCCCGCAGC TGGCGCCGTA CCCGGTGCAG
CTGAGCCTGG GCGTGCTGGC GGTCATCACC GTCATCAACC TGCGCGGCGT CGCGCAAAGC
GCGCGGGCGT TCATGCTGCC CACCGTCGTC TACGTGCTGG CGATCGGGAC GGTCATCGCG
GTGGGCCTGT TCCGCGACGG CCCGGCCGCC GCGCCGCTGC CGTCGTCCGG CGCGGTCGAG
ACCGTCGGGA TCCTGTTGCT GCTCAAGGCA TTCGCCAACG GCTGCGCCGC CCTGACCGGC
GTGGAGGCGA TCGCCAACGC GGTGCCGTCG TTCCGGCAGC CCCGCGCCAG ACGCGCCCAG
CGCACCGAAC TGGCGCTGGG CGGGCTTCTG GGCGTCATGC TCATCGGTAT CGCCGTGCTG
ATCGAGAAGT TCTCCATCCA CCCGCAGGAC GGCACCACGG TGCTGGCGCA GGTCACCAAT
GCCGCGCTGG GACACGGGAT CGCGTTCTAC GTCGTCCAGT TCGCCACCAT GATCCTGCTG
GCGCTGGCCG CCAACACCTC GTTCGGCGGG CTGCCGGTGC TGGCCCGGCT GCTGGCCGCC
GACAACTACC TGCCGCACGT GTTCGCGCTG CGCGCCGACC GGCAGGTGTA CCGCTACGGG
GTCGGCGTGC TGGCCGGGAT CGCGGCGGTG ATCCTGGTCG TCTCCGGCGG TGACATGAAC
ACGCTGGTGC CGCTGTTCGC CATCGGCGTC TTCGTCGGCT TCACGCTCGC CCAGACCGGC
ATGGTCGTGC ACTGGTGGAC GCACCGGGAG TCCGGCTGGC GGTGGCGGTT GGCGCTCAAC
GGTTTCGGCG CCGTGCTCAC CGCCGTGGCC ACAGTGGTCA CCACGGCGAC CAAGTTCACC
GAGGGCGGCT GGCTGATCGT GGTGGCGTTG CCGCTGCTGG TCTTCGGGTT CCTGCGGGTC
TGCGGGGCGT ACGAGTCGAT CGGGGAACGG CTGCGGCTCG GCGAGATCCC GCAGTCCCCG
GCGACGCACC AGCCGGTGGT CATCGTCCCG GTCCACAGTG TTTCGTCGCT GAGCCGGGAG
GCGCTGTCGG CGGCGATGTC GCTGGGCGAG GAGGTGATGG CGGTGCGGGT CGTGTTCCCC
GACGAACCGC GCGACAGGCA GCGGTTCCTG AAGGAGTGGG AAGCCTGGCA CCCCAACGTG
TCGCTGGCCC TGGTCTACGC GCCGCACCGC GACCTGGGCA AGCCGGTCGC GGAGTTCGTC
AACCGCAACT ACCGGGGCCG ACGGGTGTTC GTCGTCATCG CCGAGATCGA GCCGGAACGG
TTGTGGCAGC GACTGTTGCG CAACAACCGG GGCAAGGTCC TCGACCGCGC GGTGCGCAAG
CACACCAGTG CGGTCAGCTG CCGGGTCCGG TACAAACTGG CGGGACCGCG CCTCAGGTGA
|
|---|
| Protein sequence | MVTTPLKLHP APEHDEPEPR RKYSPPAGAA ARDDKHRLTV CGGLAALSLD AMASVAYGPE
AIVLVLAAAG AYGLGFTLPV TIAIAVLLAV LVFSYRQVIA AFPGGGGAYG VAKARLGKHA
GLTAAASLVL DYVLNVAVSV AAGVAALTAA VPQLAPYPVQ LSLGVLAVIT VINLRGVAQS
ARAFMLPTVV YVLAIGTVIA VGLFRDGPAA APLPSSGAVE TVGILLLLKA FANGCAALTG
VEAIANAVPS FRQPRARRAQ RTELALGGLL GVMLIGIAVL IEKFSIHPQD GTTVLAQVTN
AALGHGIAFY VVQFATMILL ALAANTSFGG LPVLARLLAA DNYLPHVFAL RADRQVYRYG
VGVLAGIAAV ILVVSGGDMN TLVPLFAIGV FVGFTLAQTG MVVHWWTHRE SGWRWRLALN
GFGAVLTAVA TVVTTATKFT EGGWLIVVAL PLLVFGFLRV CGAYESIGER LRLGEIPQSP
ATHQPVVIVP VHSVSSLSRE ALSAAMSLGE EVMAVRVVFP DEPRDRQRFL KEWEAWHPNV
SLALVYAPHR DLGKPVAEFV NRNYRGRRVF VVIAEIEPER LWQRLLRNNR GKVLDRAVRK
HTSAVSCRVR YKLAGPRLR
|
|---|
| |