| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1434 |
|---|
| Symbol | |
|---|
| ID | 8882621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1517561 |
|---|
| End bp | 1519426 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | SNF2-related protein |
|---|
| Protein accession | YP_003510233 |
|---|
| Protein GI | 291298955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0748383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.519779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTGGT GGGGCGGGGG CTCCGATCTC GTCGAAGCCG TCCGCAAACA CGGACTCCCC
GACGGCGCTC CCGGCAGACT CCGACTGGCG GTCCCCACAC AGGACGGTGA CGGTTTCACC
GTCGACAGGT TCCCGGTGCG GCTGGTCCCG TTGACGCAGG CCGCTCCCGC GCTGGCGGCG
CTGCGTGTCG ACAAGCACAC CAGTGACTCA CTGCGCGCCT GGCGGGCCGC CGCGATCCTG
GCACTGTCGC AACCGGACCC GGGCAAGCTG GCCGAACTGG CGGAGATGAT GCCCGCCGCC
GCCCACGCCC TGTGCCGGGA CGAGGCGAGT CTGTGGCCCG CCGACACCCT CGTCAGCGCC
TTCGCCCATG CCACCCGGGC GACCTATATG TCCGAGAAGG ACACCGCGCG GGAGCTGCGC
GACGCCCAGG AGGAGCTGGC CCCCGACGCC CGGGTGGAGG CCACGCTGCG TCCCTACCAG
CGGCGCGGGC TGGCCTGGCT GCGCGCCGTC GCGGCCCACC ACCGCGGCGC GCTGCTGGCC
GACGACATGG GTCTGGGCAA GACGCTGCAG ACCATCGCGC TGTTGGCGGA ACGGACCTCC
AACCGTCCAC ATCTGGTGGT GTGCCCCACG TCGGTGGTCG GCAACTGGAC CCGTGAGATC
GCCCGGTTCG CGCCGGACCT CCCGGTTGTG CTCCACCATG GACCGTCGCG TCGCGAAGTG
GCCCGTTTTC CCGATGGTGC GGTCGTTGTC ACCAGCTATA ATCTCCTGCT GCGCGATATC
GACCTTTTGT CCATACTTGA TTGGGATGTG GTTGTTCTCG ATGAGGCCCA GCAGATCAAG
AATCAGGCAT CCCAGACCGC CAAAGCCGCC CGAATTCTGC CCGCCCAGGC TCGCGTCGCA
TTGACCGGTA CCCCGGTGGA AAACCGGCTG GGTGAACTGT GGTCAATTAT GGATTTCGTG
AATCCCGGCA TTCTCGGCTC ATATTCACGG TTCCAGAAAC GATTCGCCAG CCCGATCGAA
TCGCGCGCCG ACGCCCGCGT CACCGAACGA CTGCGCGGCA TCGTGCAGCC GTTCCTGTTG
CGCCGCCTCA AAAGCGAGGT GGCCGCGGAT CTGCCCGCCA AGCAGGAGTC CACTGTCGCG
TGCACGCTGA CGTCCGAACA GGCCAAACTG TATTCGGCCG CCGTGGAGCG AGCCATGAAC
GACGGCCTGG GTTCCGGTTT CGAGCGGCAC GGCCGGGTCC TCAAACTGCT GACCGAACTC
AAGCAGATCT GCAACCATCC GGCGCAGTTC CTGCGTCAGG AGCACCCGCT GACCGGTCGC
TCCGGAAAGC TCGCCCGCGC CACCGAGATG CTCGCCGAGG CCGTCGCCGA GGGCGCCCAG
TCGCTGGTGT TCACGCAGTA CCGGGTGATG GGCGAGCTGT TGGCCACGCA CCTGGCCGCC
GAGCTGGGGC TGGAGAAAGT GCCGTTCCTG CACGGCGGGG TCTCGCAGCC CGGCCGGGAC
GCGATGGTGG CCGAGTTCCA GTCGGGCGAC GATCCGCCGC CCATCCTCAT CGTCAGTCTC
AAGGCGGGCG GCACCGGTCT CAACCTCACC GCCGCCACCC ACGTCCTGCA CTACGACCGG
TGGTGGAACC CGGCCGTGGA GGACCAGGCC ACCGACCGGG CGCACCGCAT CGGACAGACC
AAGCCCGTAA CCGTCTACAA GCTCGTCACC GGCGGCACGC TCGAGGAGCG CATCTCGGAC
CTGTTGGAGC GCAAGCGTTC CCTGGCCGAG TCGATCGTCG GCACCGGGGA GGACTGGATC
ACCAACATGG ACGACAAGCA GCTGCGGCAG CTGATCGAGC TGTCCGACGT GGCGGTGACC
GAATGA
|
|---|
| Protein sequence | MVWWGGGSDL VEAVRKHGLP DGAPGRLRLA VPTQDGDGFT VDRFPVRLVP LTQAAPALAA
LRVDKHTSDS LRAWRAAAIL ALSQPDPGKL AELAEMMPAA AHALCRDEAS LWPADTLVSA
FAHATRATYM SEKDTARELR DAQEELAPDA RVEATLRPYQ RRGLAWLRAV AAHHRGALLA
DDMGLGKTLQ TIALLAERTS NRPHLVVCPT SVVGNWTREI ARFAPDLPVV LHHGPSRREV
ARFPDGAVVV TSYNLLLRDI DLLSILDWDV VVLDEAQQIK NQASQTAKAA RILPAQARVA
LTGTPVENRL GELWSIMDFV NPGILGSYSR FQKRFASPIE SRADARVTER LRGIVQPFLL
RRLKSEVAAD LPAKQESTVA CTLTSEQAKL YSAAVERAMN DGLGSGFERH GRVLKLLTEL
KQICNHPAQF LRQEHPLTGR SGKLARATEM LAEAVAEGAQ SLVFTQYRVM GELLATHLAA
ELGLEKVPFL HGGVSQPGRD AMVAEFQSGD DPPPILIVSL KAGGTGLNLT AATHVLHYDR
WWNPAVEDQA TDRAHRIGQT KPVTVYKLVT GGTLEERISD LLERKRSLAE SIVGTGEDWI
TNMDDKQLRQ LIELSDVAVT E
|
|---|
| |