Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1406 |
Symbol | |
ID | 8882593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1489707 |
End bp | 1490918 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | PHP domain-containing protein |
Protein accession | YP_003510206 |
Protein GI | 291298928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.407213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCCG AGACCACACT GACCGGTGTC TGGACGCCCG GCGATCGGGC CGAGGGCTTC TACCGGTACC TGCCGTTCGA GGTGCCCACC GGGACGAACG CGGTGCGGGT GCGGCTGGAG TACCCGCGCG CGGGCGGCGT GCTGGACCTG GGTTGCTTTG GCGCGGAAGG CTTTCGGGGC TGGTCGGGCG GCGCCCGCGA CCGCTGTGAG ATCGGCGAGT CGGCCGCGAC CCCCGGCTAC CTGCCGGGCG AACTCGAAAC CGGACAGTGG AATGTGGTGC TCGGTCTGCA CCGGGTGCCG CAACCGCTGG AGTACACCGT CACGATCGCG ACCTCGGCCG ATCCGGTGAC CCGCGTCGAG GAACGGGTGC CGGTCGCCAC CGAGCGCCGT CCCCGCCGCG ACCTGCCCGC TCCCACCGGG ATGCGTTGGG CGGCGGGCGA TCTGCACTCC CACTCCGAGC ACTCCGACGG GACGCTCAGC CTCGACGCGC TCGCCGCGTC GGCGGCGTCC GCCGGGCTGG ACTTCCTGGC GGTCACCGAC CACAACACCG TCAGCCACCA CCCGCACCTG GCCGCCGCCG GTGACCGGCA CGGCGTCCTG CTGCTGCCCG GCCAGGAGGT GACCACCGAA CGCGGGCACG CCAACGCCTT CGGGCCGCTG CCGTGGATCG ACTTCCGCCG TCCGGCCCAA CACTGGCTCG AGACCACCGA GGCCGCCGGT GGCCTGCTGT CGGTCAACCA CCCCATCGCG GTCGACTGCG CCTGGCGCCA GCACCTGTCC CGCCCCGCCC CGCTGGCCGA GGTGTGGCAC TGCACCTGGC GCGACCGCAC CTGGAGCGGC CCACTGGCGT GGTGGCTGGC CAACGGCACG GCCACCACCG CGATCGGCGG CTCCGACTTC CACGAACCCG GCCGCGACCG CCCGCTCGGC CAACCCACCA CCTGGGTCCT GGTCCCCGAC GGCGAGCCGA CGGTGGCGGC GGTCCTGGAG GCCCTGCGAA CCGGCACGGT CGCGATCGCG GCCGACATCG ACGGCCCGGC GCTGCTGCGC GTCGAGGACG AACTGGTCGC GGTGGCCGCC GACGGCGCGA TCCTCAGCGA CTACTCGGGA CGACGCCGAC TGGTGCGCGG CGAGACGGCC CGGTTCCCCG CCCCGGCGGG ACCGCACTGG CTGGAGGACT CCCGCACCAC GGTGCTGGCG ATCGCGAACT GA
|
Protein sequence | MAAETTLTGV WTPGDRAEGF YRYLPFEVPT GTNAVRVRLE YPRAGGVLDL GCFGAEGFRG WSGGARDRCE IGESAATPGY LPGELETGQW NVVLGLHRVP QPLEYTVTIA TSADPVTRVE ERVPVATERR PRRDLPAPTG MRWAAGDLHS HSEHSDGTLS LDALAASAAS AGLDFLAVTD HNTVSHHPHL AAAGDRHGVL LLPGQEVTTE RGHANAFGPL PWIDFRRPAQ HWLETTEAAG GLLSVNHPIA VDCAWRQHLS RPAPLAEVWH CTWRDRTWSG PLAWWLANGT ATTAIGGSDF HEPGRDRPLG QPTTWVLVPD GEPTVAAVLE ALRTGTVAIA ADIDGPALLR VEDELVAVAA DGAILSDYSG RRRLVRGETA RFPAPAGPHW LEDSRTTVLA IAN
|
| |