Gene Snas_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1364 
Symbol 
ID8882551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1439468 
End bp1441270 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content67% 
IMG OID 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_003510164 
Protein GI291298886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.553842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC CTCGCCTGTT CACCACACTC GCCCTCACCG CCGTACTGGC TCTCACCGGA 
TGCGCCCCCA CCGCCTCCGA CGACGACGGC GACACGAAGG TCGACGCCAG CGCCAAGGCC
CGTGACTGGG CCGAACGCCA ACTCAAGTCG CTCAGTCTTG AGGAGAAGGT CGGCCAGATG
TTCACCCACT ACGCCTACGG CCAGACCGCC GACACCACCG AGTCGGCCGA TGTCAAACGC
AACCAGAAAC TTCACGGCGT CGACAACGCC AAGCAGCTGA TCGAGAAGTA CCACCTCGGC
GGAATCATCT ACTTCGGATG GTCGAACAAC CTCGCCAACC CCGGCCAGGT CGCCGGACTG
TCCAACGGGA TGCAGAAGAC CGCGATGTCC CAGGGCGGCG AGATACCGCT GCTGGTGTCC
ACCGACCAGG AGACCGGCAC CGTGGTGCGG CTGGGCCCAC CGGCCACCGA ATGGCCCGGC
AACATGGCGC TGGGCGCCGG ACGCGACCGC GGCGACGCCC GCGACACGGC GGCCATCGCC
GGGGTCGAGC TGCGCGCCGT GGGCATCAAC CAGAACTTCG CGCCCTCGGG CGACGTCAAC
GTCAACCCGC AGAACCCGGT CATCGGGGTG CGCTCGTACA GCTCCGACCC GAAACTGGTC
GCCAAGTTCA CCGGCGAACA GGTCAAGGGC TACCAGGGCC GCCACGGCAC CAGCGCCACC
GTGAAGCACT TCCCGGGCCA CGGCGACACC CACGAGGACA GCCACACCGA CCTGCCGCGC
ATCGAGCACA CCAAGGAACA GTGGAAGAAG CTGGACGCGC CGCCGTTCAA GGCCGCCATC
AAGTCCGGTG TCGACACCGT GATGTCGGCG CACATCCAGT TCCCGGCGCT GGACGCGTCC
GAGAAACCCG CCACCCTGTC CAAGCCGATC CTGACCGGAC TGCTGCGTGA GGAACTGGGC
TTCGACGGCG TGATCGTCAC CGACTCGCTG GGGATGCAGG GCGTGCGCGA GCTGTACACC
GACGCCGAGA TCCCCGTCAT GGCCATCAAG GCCGGGGTCG ACCAGCTGCT GATGCCCGCC
GACCTGAAGG TCGCCTACGA AGCGGTGCTG GCCGCCGTCA AGAGCGGTGA GATCACCGAG
AAGCGCATCG ACAAGTCGGT GAAGCGACTG CTGACGCTGA AGTACCTGCG CGGCGTCGTC
AAGAACCCCT ATGTGGACCC CGACAAGGTC GACGACACCG TCGGCACCGA GGATCACCTG
GCCACCGCCC AGGCGATCAC CGACAAGACC ACGACACTGG TCAAGAACGA CGGCGACGCG
CTGCCGCTGT CGAAGGACAC CGGCAAGGTC TTCGTGGCCG GGGACGGCGC CAACACCACG
TCCATCCTGG CCAAACAGAT CGGCAAGCTG GGTCCGGCCA CCGAGGCGCT CAACACCGGC
GCCGACCCCA ACGCCGCCAC CATCTCCGGG GCGGTCGAGA AGGCCAAACA GGCCGACGTC
GCGGTGGTGG CCACCAACAC CGTCCGCGCC CACCCGGCCC AGGCCGACCT GGTGAAAGCC
TTGCGCGACA GTGGAACCAA GGTGGTCGTC GTCGGGGTCA AGGAACCCTA CGACATCAAC
CGGTTCCCGG AGGTCGACTC CTATGTGGCC TCCTACGGTT ACAACACGCC GGTGCTGACC
GCCGTCGCCA AGGTGCTGTT CGGCGAGGTG GACCCGCGCG GCAAGCTGCC CGTCACGATT
CCCAAGGCCG ACGACCCCGA CGCGACGTTG TACGAGTTCG GGCACGGCCT CTCCTACGAG
TAA
 
Protein sequence
MPRPRLFTTL ALTAVLALTG CAPTASDDDG DTKVDASAKA RDWAERQLKS LSLEEKVGQM 
FTHYAYGQTA DTTESADVKR NQKLHGVDNA KQLIEKYHLG GIIYFGWSNN LANPGQVAGL
SNGMQKTAMS QGGEIPLLVS TDQETGTVVR LGPPATEWPG NMALGAGRDR GDARDTAAIA
GVELRAVGIN QNFAPSGDVN VNPQNPVIGV RSYSSDPKLV AKFTGEQVKG YQGRHGTSAT
VKHFPGHGDT HEDSHTDLPR IEHTKEQWKK LDAPPFKAAI KSGVDTVMSA HIQFPALDAS
EKPATLSKPI LTGLLREELG FDGVIVTDSL GMQGVRELYT DAEIPVMAIK AGVDQLLMPA
DLKVAYEAVL AAVKSGEITE KRIDKSVKRL LTLKYLRGVV KNPYVDPDKV DDTVGTEDHL
ATAQAITDKT TTLVKNDGDA LPLSKDTGKV FVAGDGANTT SILAKQIGKL GPATEALNTG
ADPNAATISG AVEKAKQADV AVVATNTVRA HPAQADLVKA LRDSGTKVVV VGVKEPYDIN
RFPEVDSYVA SYGYNTPVLT AVAKVLFGEV DPRGKLPVTI PKADDPDATL YEFGHGLSYE