Gene Snas_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1214 
Symbol 
ID8882400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1289287 
End bp1289667 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content66% 
IMG OID 
Product30S ribosomal protein S13 
Protein accessionYP_003510017 
Protein GI291298739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00698597 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACGTC TCGTTGGTGT CGATCTTCCG CGCGAAAAGC GCCTGGAGAT CGCCCTTACG 
TACATCTTCG GTGTCGGCCG CACCCGCTCG GTCGAGACCT GCGCCGCGAC GGGCATCGAC
CCGTCCAAGC GCGTCCACGA ACTGACCGAC GCCGAGCTGG TTCAGCTGCG CGATCACATC
GAGGGCAACT ACCAAGTCGA AGGTGACCTG CGCCGCGAGG TCGCCGCTGA CATCCGCCGC
AAGGTGGAAA TCGGGTGCTA CCAGGGAATC CGGCACCGCC GGGGTCTGCC GGTGCACGGA
CAGCGGACCC GGACCAACGC GCGTACCCGC AAGGGCCCCA AGCGCACGGT CGCTGGCAAG
AAGAAGCCGG GCAAGAAGTA G
 
Protein sequence
MARLVGVDLP REKRLEIALT YIFGVGRTRS VETCAATGID PSKRVHELTD AELVQLRDHI 
EGNYQVEGDL RREVAADIRR KVEIGCYQGI RHRRGLPVHG QRTRTNARTR KGPKRTVAGK
KKPGKK