Gene Snas_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0999 
Symbol 
ID8882184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1059758 
End bp1060660 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509802 
Protein GI291298524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.438735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.505813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG CCATACACAC TGAAAGCCTG GTCAAGCACT TCGGCCAGGT ACACGCACTC 
GACGGGCTCG ATCTGTCGGT TCGCACCGGC GAAGTCCACG GTTTCCTGGG TCCCAACGGC
GCCGGGAAGT CCACCGCCAT CCGCGTCCTG CTCGGCCTGC TGCGGGCCGA CGGCGGGACG
GCGAGCCTGC TGGGCGGCGA CCCCTGGCGT CAGGCCACCA AACTGCACCG GCGGCTGGCC
TACGTGCCCG GTGACGTGAA CCTGTGGCCC AACCTGTCCG GCGGCGAGGT CATCGACCTG
CTGGGACGAC TGCGGGGCGG CCTGGATCCC AAGCGCCGCA AGGACCTGCT CGAACGCTTC
GACCTCGACC CGCGTAAGAA GGGCCGCACC TACTCCAAGG GCAACCGGCA GAAGGTGGCC
CTGATCGCGG CACTCGCCTC CGATGTGGAG CTGCTGTTGC TGGACGAACC GACCTCCGGG
CTGGACCCGT TGATGGAACA GGTCTTCCGC GACTGCATCA CCGACGAACG TCGCGACGGA
CGCACCGTGC TGCTGTCCAG CCACATCCTG TCCGAGGTCG AGGCGCTGTG CGACCGGGTC
AGCATCATCC GCAACGGGAA GATCGTCGAG TCCGGGACGC TGTCCGAACT GCGCCACCTG
ACCCGCACGT CGATCCACGC CGAGCTCATC AGCTCCCCCA ACGGACTGTC CAGCCTGGAG
GGCGTCCACG ACCTGGTCGT GGACGGGACC CACGTGCGCT GCCAGGTCGA CACGGCCAAA
CTCAACTCGG TGCTCGCGAA GCTCACCCAG ACCGGTGTGG ACAGTCTCAC CTGTACCCCG
CCGACCCTGG AGGAACTGTT CATGCGGCAC TACTCCGACG ACATCACCAA GGCGGAGGCA
TGA
 
Protein sequence
MENAIHTESL VKHFGQVHAL DGLDLSVRTG EVHGFLGPNG AGKSTAIRVL LGLLRADGGT 
ASLLGGDPWR QATKLHRRLA YVPGDVNLWP NLSGGEVIDL LGRLRGGLDP KRRKDLLERF
DLDPRKKGRT YSKGNRQKVA LIAALASDVE LLLLDEPTSG LDPLMEQVFR DCITDERRDG
RTVLLSSHIL SEVEALCDRV SIIRNGKIVE SGTLSELRHL TRTSIHAELI SSPNGLSSLE
GVHDLVVDGT HVRCQVDTAK LNSVLAKLTQ TGVDSLTCTP PTLEELFMRH YSDDITKAEA