Gene Snas_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0930 
Symbol 
ID8882114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp984082 
End bp984666 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003509734 
Protein GI291298456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTC AAACCCGCAA GGAACGCGAA CGCGCGCAAC GGCACCAGCT GATCATCACC 
ACGGCCCGCG AACTCGCCGA GGCCGACGGC TGGGACGCGG TCACCACCCG CAAGCTGTCG
GAACGCATCG AGTACAGCCA GCCGGTGCTG TACAGCCACT TCAAGGGCAA ACGCGCCATC
ATGGACGCCG TCATCCTGGA GGGGTGCGCG GAACTGGCCG TGCTGATGCG GGAGGCGCGC
ACCCGGGCCC GTCGGCCGGA CACCGCCCTG ACCGCCGTCG CCGACGCGTA CATGGACTTC
GGCCGCGAGC ACCCGGCGAC CTTCGACGCC ATGTTCACGC TGCCCAGCGA CCTGCCCTTC
GGGCCCGAGG CCCCGCAACC GCTCAAGGAC GCCTTCGCCG AGTTGTACGC GGTCTTCTCG
CCGCTGGCGG GCAGCCGTGA CCCGATGGTG TTCACCGAGG TCGGCTGGAG CGCCATCCAC
GGCGTGGCCG TCCTGGACCG CAGCGGCAGG CTGCCGCCCC AGGACGCCAA CAAACGGCTG
TCGATACTGG TCAAACAGCT GCTGGCCCCC GAGCCGGGGG ACTAG
 
Protein sequence
MSTQTRKERE RAQRHQLIIT TARELAEADG WDAVTTRKLS ERIEYSQPVL YSHFKGKRAI 
MDAVILEGCA ELAVLMREAR TRARRPDTAL TAVADAYMDF GREHPATFDA MFTLPSDLPF
GPEAPQPLKD AFAELYAVFS PLAGSRDPMV FTEVGWSAIH GVAVLDRSGR LPPQDANKRL
SILVKQLLAP EPGD