| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0899 |
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| Symbol | |
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| ID | 8882083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 949641 |
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| End bp | 952400 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509703 |
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| Protein GI | 291298425 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0538686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCGA TCCTCGCCGC CCGGGTGGGG GCCGTGGTCT CGATCGCGCA CCTGACCGAA
CAGCTGTGGC GCGACGATCC GCCGCAGCGC GCCCGCGCCA CCCTGTACAG CTACCTGTCG
CGGCTGCGCA AGATCTTCGC GGCCACGGCG GTGTCGATCC GGCGCCGCTC CGGCGGCTAC
CTGCTGGAGG CCGACCCGTT GACAGTGGAC GTGAACCGGT TCCGGGAGCT GGTGTCCCGG
GCCCGCGACG GCGGTGACCT CGCCGACTGG GACGCGGCGA TGGCGCTGTG GCGCGGCGAA
CCGTTCGCGG AACTCGACGT CCCGGAGCTC GACAACCTGC GGACCACTTT GGACGCGGAA
CACTTCGCGG CGGTGCTGGA CCGCAACGAC GCGCTGCTGC GGCGCGGTGA GCACACCCGG
GCGCTGCCGG AACTGCACGA ACTCGCCGAA CGCTCCCCCT GGGACGAGCG CCTGGCCGGG
CAGCTGATGC TGGCCCTGTA CCGCTGTGGC CGGCCGAGCG AGGCGCTGGA CCACTATCGA
CGGTTGTCGA CCCGGCTGAT CACCGAACGC GGCGTCGAGC CCGGCCCGGA ACTGTCGGCG
CTGCACCGCG AGATCCTCAA CGACGCCCCG AGCCTGCGCG CCTCGTCGCC CGACGAGCGC
GACGGCGGGC CCGTACCGGT ACCGCCCCGC GACCGGACGA CGGTGACGCC GCGCCAGCTG
CCCGGGGACA TGCCCGGATT CACCGGACGG CAGACCCACC TCGACCAGCT CGACCGGCTG
CTGGCGGGCG GCGACCGCAC CATCGTCGTC TCCGGAACCG CGGGCGTCGG GAAGACCTCG
CTGGCGGTGC ACTGGGCCCA CCGGGTCGCC GAGCGGTTCG GCGAGGGCCA GCTGTACCTG
AACCTGCGCG GCTTCGACCC CGAGGCCGAA CCGCTGTCGG CCGCCGACGC GATCCTGGCC
TTCCTCGACG CGCTCGGCGT CCCCGGACCC CGGGTGCCGC CCGGCATCGA GGCCCAGACG
GCCCTGTACC GCAGTCTGGT CGCCGAACGG GAACTGCTGG TGCTGCTGGA CAACGCCCGC
GACGCCGAGC AGGTCCGGCC GCTGTTGCCC GGCGGCGATC GTTGCCTGAC CCTCGTCACC
AGCCGCAACC GGCTGGCCGG GCTCGTCGCC ACCGAGGGCG CCCGGCCGGT CGCGCTCGGC
GAGATGTCGG AACTGGAGGC CCGGGTCCTG CTGCGGGCCC GGCTCGGCTC CGAACGCGTC
GACGCCGAAA CCGAGGTCGT CACCGCACTG ATCCAGCACT GCGGCGGACT GCCGCTGGCG
CTGTCGATCG CGGCGGCCCG CGCCGAGGTG GACCCGGCCG CGTCGCTGGC GCCGTTGCTG
CGCCAGCTGG CCACCGCCGG CGGCGACTTC CTCACCCTGG ACGACGCCGA CCCGAAAACC
AGTGTCCGCA GTGTGTTCTC GTGGTCCTAT CGTTGCCTGA GCCCGGAAGC GGCGCGGCTG
TTCCGGCGGC TCGGCATCCA CCCCGGACCC AGCGTCTCGG TGACCGCCGC GGCGAGCCTG
CTCGGCGAGT CCGTCGACGG GACACTCTCG TCCCTGGAGG AACTGGTCCG CGCCCACCTC
ATCGACCGCG ACCCGTCCGG CCGGTTCACC TTCCACGATC TGCTGCGCGA CTACGCCCGC
GAACTCGCCG CCGACACCGA TCCCGAACCG GACCGGCACG CGGCCGTCAC CCGACTGCTC
GACCAGTACC TCCACGGTGC CCGCGCGGCC TGGATGCTGT GGGACAACCG CCGCAGCGCC
TACCGGCTGC CCGAACCCGC GCCCGGAACC ACACTGGACG CGATGTCCAC CGCCGAGGAC
GGTCAGGCCT GGTTCAACGC CGAGGAAACA GTCCTTATCG GACTCGTGAT GCTGGCCCAT
CGCGACGGCC ACGACGCCCA CGCCTACCGC ATGGTCCGGG CGATGGAACG GCCGCTGGAA
TGGCGCGGCC GCTGGATCGC CTGGCTGACC TGCCAGCACA TCGCCCTGAA GGCCGCCACC
CGCTGCGGCG ACCTGGCCGC CCAGTCGCAT GTCCACATGT TCCTGGGCCA CGCGGACCTC
CGCCGGGGCC GCTACCCCGA GGCCGAGGAC CACTTCGAGC GCGCCATCGA ACTGTCGGCG
GAAGTTGACG ATCACTATGG ACTGGCGCAG GCCCACGTCG GGCTCGGCAT GACCTTCAAG
CGGCAGGACA AAATCGACCT GGCACTCGAA CACGAGTATC GCGTCTGCGA GATCTACGAG
GCCGAGGGGG GCGTTGAGCC CGGCTACCTG TTCGCGCTCA ACAACCTGGG CCGCACCCTC
GCCCTGCACG GGGACCACGC CGAGGCGCTT CGCCGCTGCG AACGCGCGCT GGAGCTCGGG
GTCGAACACG CGAACCGGCG GGCGATAGCC TCCGCTTTGG ACAATCTCGG TTTCGTCCAC
GCCCAACGCG GCGATTCGCG TACGGCAATC GGCTACTACG AACGCGCCGT GGCCGCGGAA
CGGGAGTTCG GGAACGCGTT CAACGAGGCC CGGACTCTGA TGTCCTACGG TGACGTCCTG
TGCGAAGCGG GCGAGACGAC CGCCGCCGTC GACCGGTACC GGCGGGCGGT GGCCATCTTC
GATCGCCTCG ATCCGGACGG AAGCCAGGAG GCCGACGAGG CCCGCGCCAA GCTGAACCTG
CTCGGCGGCG GAACCGATGA CCCGGTCCTG GAGACCGCAA CGGGAGGCGA ATCCCGGTGA
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| Protein sequence | MLAILAARVG AVVSIAHLTE QLWRDDPPQR ARATLYSYLS RLRKIFAATA VSIRRRSGGY
LLEADPLTVD VNRFRELVSR ARDGGDLADW DAAMALWRGE PFAELDVPEL DNLRTTLDAE
HFAAVLDRND ALLRRGEHTR ALPELHELAE RSPWDERLAG QLMLALYRCG RPSEALDHYR
RLSTRLITER GVEPGPELSA LHREILNDAP SLRASSPDER DGGPVPVPPR DRTTVTPRQL
PGDMPGFTGR QTHLDQLDRL LAGGDRTIVV SGTAGVGKTS LAVHWAHRVA ERFGEGQLYL
NLRGFDPEAE PLSAADAILA FLDALGVPGP RVPPGIEAQT ALYRSLVAER ELLVLLDNAR
DAEQVRPLLP GGDRCLTLVT SRNRLAGLVA TEGARPVALG EMSELEARVL LRARLGSERV
DAETEVVTAL IQHCGGLPLA LSIAAARAEV DPAASLAPLL RQLATAGGDF LTLDDADPKT
SVRSVFSWSY RCLSPEAARL FRRLGIHPGP SVSVTAAASL LGESVDGTLS SLEELVRAHL
IDRDPSGRFT FHDLLRDYAR ELAADTDPEP DRHAAVTRLL DQYLHGARAA WMLWDNRRSA
YRLPEPAPGT TLDAMSTAED GQAWFNAEET VLIGLVMLAH RDGHDAHAYR MVRAMERPLE
WRGRWIAWLT CQHIALKAAT RCGDLAAQSH VHMFLGHADL RRGRYPEAED HFERAIELSA
EVDDHYGLAQ AHVGLGMTFK RQDKIDLALE HEYRVCEIYE AEGGVEPGYL FALNNLGRTL
ALHGDHAEAL RRCERALELG VEHANRRAIA SALDNLGFVH AQRGDSRTAI GYYERAVAAE
REFGNAFNEA RTLMSYGDVL CEAGETTAAV DRYRRAVAIF DRLDPDGSQE ADEARAKLNL
LGGGTDDPVL ETATGGESR
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