Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0873 |
Symbol | |
ID | 8882057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 921352 |
End bp | 923319 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | acetate/CoA ligase |
Protein accession | YP_003509677 |
Protein GI | 291298399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.695472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGAGA CCCCGAAGTC GCAAGAGACT CTCGCTAATC TGCTCAACGA GACGCGGCAT TTCGACCCGC CCGCGGAATT CGCCGCCCAG GCTACCGTCA CCGCTGACGA GTACGACCGC GCGGGTGCCG ACCGGCTGGC GTTCTGGGAA TCGAAAGCCG AGCGCTTGCA CTGGGCCGCC AAGTGGGACC GGACCCTTGA CTGGGACAAC CCGCCGTTCG CGAAGTGGTT CGTCGGCGGC AAGCTCAACG TCGCCTACAA CTGTCTGGAC CGGCACGTCG AGGCCGGAAA CGGCGACCGG GTGGCGATCC ACTGGGAGGG CGAGCCGGGC GACACCCGCA CCATCACCTA CGCCGAGCTG ACCAGCGAGG TCAAGAAGGC CGCCAACGCG CTCACCGCGC TGGGCGTCAC CGCCGGGGAC CGGGTCGCCA TCTACATGCC GATGATCCCC GAAGCGGCGA TGGCGATGCT GGCCTGCGCC CGCATCGGCG CCACCCACTC GGTGGTCTTC GGCGGCTTCA GCGTCGCGGC GCTGTCGGGC CGGATCCAGG ACGCTGACGC CAAGGTCGTC ATCACCGCCG ACGGCGGCTA CCGGCGCGGC AAGCCCAGCG ACCTCAAGGG CATTGTGGAC GATTCGGTGG CGCAGTGTCC GTCGGTGGAG AAGGTGCTCG TGGTGCGCCG CACCGGCTCC GACGTCGCCT GGACCGACAA GGACCTGTGG TGGCACGACG TGGTCGACTC CGCGTCGGAC GAACACGAGG CGCAGCCCTT CGACGCCGAG CACCCGCTGT TCATCCTCTA CACGTCGGGA ACCACCGCCA AGCCCAAGGG CATCCTGCAC ACCTCCGGCG GCTACCTGAC CCAGGCCTCA TACACCCACC AGGCCGTGTT CGACATCAAG CCCGACAACG ACATCTACTG GTGCACCGCC GACATCGGCT GGGTCACCGG CCACTCGTAC ATCGTGTACG GTCCGATGTC GAACGGCGTC ACGCAGGTCA TGTACGAGGG CACCCCCGAC ACGCCCCACA AGGGACGTTT CTGGGAACTG GTGCAGAAGT ACAGGATCAC CCAGATCTAC ACCGCGCCCA CCGCGATCCG CACCTTCATG AAGTGGGGCG ACGACATCCC GGCCGGGTTC GACCTGTCGA GCCTGCGGGT CCTGGGTTCG GTGGGCGAGC CCATCAACCC CGAGGCGTGG ATGTGGTATC GCAAGCACAT CGGCGGCGAC CGCTGCCCGG TCGTGGACAC CTGGTGGCAG ACCGAGACCG GCGCGATGAT GATCTCGCCG CTGCCGGGCG TCACCTCCAC GATCCCCGGC TCGGCCCAGA CCCCGCTGCC GGGCATCAGC GCCGACGTCG TCGACGACGA GGGCAAGTCG GTGCCCAACG GCGGCGGTGG CTACCTGGTG CTGCGCGAGC CGTGGCCGTC CATGCTTCGC ACCATCTGGG GCGACGACCA ACGCTTCCTC GACACCTACT GGTCCAAGTT CGACAACATG TACTTCGCCG GTGACGGCGC CAAACGCGAT GCCGACGGCA ACATCTGGCT GTTGGGCCGC GTCGACGACG TCATGCTCGT GTCCGGCCAC AACATCTCGA CCACCGAGGT CGAATCGGCC CTGGTCTCGC ACCCGAAGGT CGCCGAGTCG GCGGTCGTCG GCGCCACCGA CCCGGTCACC GGCCAGGGCA TCGTGGCGTT CACGATCCTG CGCGGCGACG CGGACGGCGG CGAGGAACTG ATGACCGAAC TGCGCAACCA CGTCGCCAAG GAACTCGGCC CGATCGCCAA GCCGCGCCAG ATCATGGTCG TCCCCGAGCT CCCCAAGACC CGCTCGGGCA AGATCATGCG CCGCCTGCTG CGCGACGTCG CCGAGAACCG TTCCCTGGGC GACGTGACGA CGCTCCAGGA CTCGGCCGTC ATGGACCTCA TCTCCAAGGG CATGTCCTCC GGCAAGGACG AGGACTGA
|
Protein sequence | MNETPKSQET LANLLNETRH FDPPAEFAAQ ATVTADEYDR AGADRLAFWE SKAERLHWAA KWDRTLDWDN PPFAKWFVGG KLNVAYNCLD RHVEAGNGDR VAIHWEGEPG DTRTITYAEL TSEVKKAANA LTALGVTAGD RVAIYMPMIP EAAMAMLACA RIGATHSVVF GGFSVAALSG RIQDADAKVV ITADGGYRRG KPSDLKGIVD DSVAQCPSVE KVLVVRRTGS DVAWTDKDLW WHDVVDSASD EHEAQPFDAE HPLFILYTSG TTAKPKGILH TSGGYLTQAS YTHQAVFDIK PDNDIYWCTA DIGWVTGHSY IVYGPMSNGV TQVMYEGTPD TPHKGRFWEL VQKYRITQIY TAPTAIRTFM KWGDDIPAGF DLSSLRVLGS VGEPINPEAW MWYRKHIGGD RCPVVDTWWQ TETGAMMISP LPGVTSTIPG SAQTPLPGIS ADVVDDEGKS VPNGGGGYLV LREPWPSMLR TIWGDDQRFL DTYWSKFDNM YFAGDGAKRD ADGNIWLLGR VDDVMLVSGH NISTTEVESA LVSHPKVAES AVVGATDPVT GQGIVAFTIL RGDADGGEEL MTELRNHVAK ELGPIAKPRQ IMVVPELPKT RSGKIMRRLL RDVAENRSLG DVTTLQDSAV MDLISKGMSS GKDED
|
| |