Gene Snas_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0873 
Symbol 
ID8882057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp921352 
End bp923319 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content68% 
IMG OID 
Productacetate/CoA ligase 
Protein accessionYP_003509677 
Protein GI291298399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.695472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA CCCCGAAGTC GCAAGAGACT CTCGCTAATC TGCTCAACGA GACGCGGCAT 
TTCGACCCGC CCGCGGAATT CGCCGCCCAG GCTACCGTCA CCGCTGACGA GTACGACCGC
GCGGGTGCCG ACCGGCTGGC GTTCTGGGAA TCGAAAGCCG AGCGCTTGCA CTGGGCCGCC
AAGTGGGACC GGACCCTTGA CTGGGACAAC CCGCCGTTCG CGAAGTGGTT CGTCGGCGGC
AAGCTCAACG TCGCCTACAA CTGTCTGGAC CGGCACGTCG AGGCCGGAAA CGGCGACCGG
GTGGCGATCC ACTGGGAGGG CGAGCCGGGC GACACCCGCA CCATCACCTA CGCCGAGCTG
ACCAGCGAGG TCAAGAAGGC CGCCAACGCG CTCACCGCGC TGGGCGTCAC CGCCGGGGAC
CGGGTCGCCA TCTACATGCC GATGATCCCC GAAGCGGCGA TGGCGATGCT GGCCTGCGCC
CGCATCGGCG CCACCCACTC GGTGGTCTTC GGCGGCTTCA GCGTCGCGGC GCTGTCGGGC
CGGATCCAGG ACGCTGACGC CAAGGTCGTC ATCACCGCCG ACGGCGGCTA CCGGCGCGGC
AAGCCCAGCG ACCTCAAGGG CATTGTGGAC GATTCGGTGG CGCAGTGTCC GTCGGTGGAG
AAGGTGCTCG TGGTGCGCCG CACCGGCTCC GACGTCGCCT GGACCGACAA GGACCTGTGG
TGGCACGACG TGGTCGACTC CGCGTCGGAC GAACACGAGG CGCAGCCCTT CGACGCCGAG
CACCCGCTGT TCATCCTCTA CACGTCGGGA ACCACCGCCA AGCCCAAGGG CATCCTGCAC
ACCTCCGGCG GCTACCTGAC CCAGGCCTCA TACACCCACC AGGCCGTGTT CGACATCAAG
CCCGACAACG ACATCTACTG GTGCACCGCC GACATCGGCT GGGTCACCGG CCACTCGTAC
ATCGTGTACG GTCCGATGTC GAACGGCGTC ACGCAGGTCA TGTACGAGGG CACCCCCGAC
ACGCCCCACA AGGGACGTTT CTGGGAACTG GTGCAGAAGT ACAGGATCAC CCAGATCTAC
ACCGCGCCCA CCGCGATCCG CACCTTCATG AAGTGGGGCG ACGACATCCC GGCCGGGTTC
GACCTGTCGA GCCTGCGGGT CCTGGGTTCG GTGGGCGAGC CCATCAACCC CGAGGCGTGG
ATGTGGTATC GCAAGCACAT CGGCGGCGAC CGCTGCCCGG TCGTGGACAC CTGGTGGCAG
ACCGAGACCG GCGCGATGAT GATCTCGCCG CTGCCGGGCG TCACCTCCAC GATCCCCGGC
TCGGCCCAGA CCCCGCTGCC GGGCATCAGC GCCGACGTCG TCGACGACGA GGGCAAGTCG
GTGCCCAACG GCGGCGGTGG CTACCTGGTG CTGCGCGAGC CGTGGCCGTC CATGCTTCGC
ACCATCTGGG GCGACGACCA ACGCTTCCTC GACACCTACT GGTCCAAGTT CGACAACATG
TACTTCGCCG GTGACGGCGC CAAACGCGAT GCCGACGGCA ACATCTGGCT GTTGGGCCGC
GTCGACGACG TCATGCTCGT GTCCGGCCAC AACATCTCGA CCACCGAGGT CGAATCGGCC
CTGGTCTCGC ACCCGAAGGT CGCCGAGTCG GCGGTCGTCG GCGCCACCGA CCCGGTCACC
GGCCAGGGCA TCGTGGCGTT CACGATCCTG CGCGGCGACG CGGACGGCGG CGAGGAACTG
ATGACCGAAC TGCGCAACCA CGTCGCCAAG GAACTCGGCC CGATCGCCAA GCCGCGCCAG
ATCATGGTCG TCCCCGAGCT CCCCAAGACC CGCTCGGGCA AGATCATGCG CCGCCTGCTG
CGCGACGTCG CCGAGAACCG TTCCCTGGGC GACGTGACGA CGCTCCAGGA CTCGGCCGTC
ATGGACCTCA TCTCCAAGGG CATGTCCTCC GGCAAGGACG AGGACTGA
 
Protein sequence
MNETPKSQET LANLLNETRH FDPPAEFAAQ ATVTADEYDR AGADRLAFWE SKAERLHWAA 
KWDRTLDWDN PPFAKWFVGG KLNVAYNCLD RHVEAGNGDR VAIHWEGEPG DTRTITYAEL
TSEVKKAANA LTALGVTAGD RVAIYMPMIP EAAMAMLACA RIGATHSVVF GGFSVAALSG
RIQDADAKVV ITADGGYRRG KPSDLKGIVD DSVAQCPSVE KVLVVRRTGS DVAWTDKDLW
WHDVVDSASD EHEAQPFDAE HPLFILYTSG TTAKPKGILH TSGGYLTQAS YTHQAVFDIK
PDNDIYWCTA DIGWVTGHSY IVYGPMSNGV TQVMYEGTPD TPHKGRFWEL VQKYRITQIY
TAPTAIRTFM KWGDDIPAGF DLSSLRVLGS VGEPINPEAW MWYRKHIGGD RCPVVDTWWQ
TETGAMMISP LPGVTSTIPG SAQTPLPGIS ADVVDDEGKS VPNGGGGYLV LREPWPSMLR
TIWGDDQRFL DTYWSKFDNM YFAGDGAKRD ADGNIWLLGR VDDVMLVSGH NISTTEVESA
LVSHPKVAES AVVGATDPVT GQGIVAFTIL RGDADGGEEL MTELRNHVAK ELGPIAKPRQ
IMVVPELPKT RSGKIMRRLL RDVAENRSLG DVTTLQDSAV MDLISKGMSS GKDED