| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0853 |
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| Symbol | |
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| ID | 8882037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 902251 |
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| End bp | 905283 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509657 |
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| Protein GI | 291298379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTATC GGATTCTGGG GCCGCTGGAG GTCGTCCGGG ACGGGGTTCC GATCGCCATC
AAGGGGCGGC ACCAACCGCG CCTGCTCGCG ATGCTGCTAC TGGAGGCGGG CCAGACGGTG
ACGCTTTCGC GGCTGGTGGA CGTGCTGTGG GACGAAGAAC CCCCGGAGAC GGCCCGGCGC
CAAGCGCAGA ACTACATGGC GGCGTTGCGC AGAACCCTCG GCACGAGCAA CCCGATCGAG
GTGGTGGGGG AGGGATACCG GTTCGCGGCT GGGGACAGCT TTGTGGACTC CGTTCGGTTC
GAGGAGCTGA ACCACCTGGC GCGTCACGAC GCACGCGAGG GCAGACATGC CAAGGCGTTG
CCGAGCTTCG ACGAGGCACT GGGCCTGTGG CGAGGACCGA CCCTGGCGGG GTTGTCGGCG
CGGTGGCTGG AATCGCGGTC AAGGCGACTC GACGATCTCC GCCTCGGCAT GATCGAGGAC
CGCGCGGCGA GCCTCCTCGA ACTGGGGCGA CACGCGGACG TGGTGGGGGA GCTGGCGGAA
CTGTTGGCGG AGAAGCCGTA TCGACAGCAG GCGGCACGAC ATCTGATGCT GGCGCTGTAT
CGGTGTGGCA GGGGTGCCGA GGCGCTGGAG GTCTTTGGGG CACTACGGAC GCGGTTGGCG
GAGGAACTGG GGATCGACCC GAATCCGATG GTGCGGGAGC TGCATGGGCG GATCCTGCGG
GAGGACGCGT CGCTGGCGGT GCCGCGGCCA GAGATGTCAA TCGTTGCGGC TAAGCCAGAG
ATTCTGGTGC CCGCACAGCT TCCGGCGGGC GTGGCGACGT TCACCGGCCG GGATGAAGAG
CTGGCCGAGT TGGACAGGCT GTTCGACTCC GGAGCCGCTG TCACCGTATT GTCGGCGATC
TCCGGTGGTG GTGGCGTGGG AAAGACTGCG TTGGCGGTCC ACTGGAGTCG GAATCGGACC
GAAAGGTTCC CTGACGGACA GCTCTACGTC AACCTGCGCG GTTTTGACCA CAATGAACCG
TTGAAGCCCA TTGACGCGCT ATCACGATTC CTTCGTGCGC TTGGGACTCC GAGCGCCAAA
ATTCCGGCAG AGACCGAGGA GGCGTCGGCG CTGTTTCGCT CGGTGATGAA CGGCCGGAAC
ATGCTGGTGG TCTTGGACAA CGCCCGAACT GCTGAGCAGG TGCGACCGTT GTTGCCGGGC
GGCCAGGACA ACGCCGTCCT GGTGACGAGC CGCAATCGGC TGGCGAGCCT GGCGGCGCTC
AATGACGCCA AGCTCATGGC TTTGGATGTG CTCAGCCTTA CGGAGTCGTT GGAGCTACTG
GCCGAGCTGA TTGGGGCTGA TCGGGTTAAC GCGGATCCGG ATTCTGCCCG TCGGCTGGTC
GAATTGTGCG GTCATCTTCC GCTGGCATTG CGGATCGCGG CCGCTAGCCT GGCGGCAAGG
TCCGATGGCT CGATATCCAA TTTGGCGTCC GAACTTGACA GCGTTTCTCG GCTGGAGATC
CTCAGCATCG AGGGCGACCC GTACTCAGCT GTTACGGCGA CGTTTGACCT ATCAGTCGGC
GCTTTGAGCA TTGAGGCCCG GGATCTGTTC CTGCGCCTGG GGATGATTCC GGGTGAGGAC
ATTGCGGAAG GACTGGCCGT TGAGGTTTCG GGCCACCAGG AGGATCGAGC CAAGGACCTG
TTGCAGGGTC TGGTTTCTGC ACACTTGCTC GAGACGCATG TTCCAGGGAG GTACCGCTTC
CATGACCTGG TGAGAATCTA TGCGCATCGT TGCGCAATTG ACAAGTTGAG TAGCTCAATT
TGTGAATCGA TTATCGATAC GCTCGTCGCT TGGTACTTCC AGAATCGTGG TCGAATCAGT
CCCGATGAAA TTCCAAATGT GGTTACCACC TGCAAGTTGC TGAACAAACA TCCGGAGATG
TGGCGGGTGG CATACACCTT GAGCATGATC ACGCACCACG GGCTCGGTTT GAAAGTCGCC
CGTGACCAAT GTGAGATCGC TTTGAGGATC GCTGAGGTGT ATAACGACAG GCATGGCCAA
GCACGCATGC TGTCTGCACT TGGGGGGATT CAATATGCAC TAGGGGAAAC GGAGCTTTCC
ATTGAATTGT CCCGGAAATC CGTAGCCACA ATAGATCCTA ATGTGGACTC ACGGACATAC
GGCGACTTGT GTAACAACCT CGGAATTCGG CTTAGTTGGA GCGGTCGGTA TCGGGAAGCC
GAGGAGTGGC TGGTGAAGTC ATTGCAGCCG GGTTATATGG CTGAAGGCGT TCATTTTGAA
CTGGTGCGCG TGCTTAATTT GGGAACTGTG TACAGGGCGT TGGGGCGTTA TGGTGATGCA
TTGGCATACC TGGATCGAAG TGCGGCACTT TTGTCGAAGC TCGAAAGCCG ATCAATCGCC
GCGAGCATTT ATCTCGCCAG AGCGCTATTG GAGAACGATC GAGGTCGCCA CCGTAAAGCT
TGGGCCTATG CCCAGGAGGC ATTGCTTGCA GGTCAGCAGT GCAAGTCTGT TCGTTCGATA
GTGATCGCGC TCCAGCAACG AGGTTTGGCA GAGTTTGGGT GCGGGAAAAT CGAGCGAGCG
CGTGAGGACT ATCTTGCGTC TACAGTACGA GCAAATGAAC ACGGAATGTC TACAGTAGAG
CGTCGCAACT ACTGTTTTCT CGCGGACCTC GAATGTTTCG CTGGCGACAA TAGTCGAGCA
GTGAAGTATC TGGAGTCAGC AGCAGCAGTG GAAGTCTTGC AACCTCCTAG ATACCTGGTT
GCAGAGATGC TGCGCGTGGA CAGCAACGTT CGTTTGAAAC TGAACGCGTA TCGGCATGCT
GTAAGTACGG GACGCAAGGC CGCAGCCTTG TTCGCCTCAA TGCCTGATCC GCTGCGCCAT
GCGCGTTCGT TGGTGATAGT CGCTAGGGCA TATGAGGGCT TGGCCGACTA CAACAAAGCA
GCAGACGCTC GCCAAGAAGC CCTAGCCATC TTCACTCGTC TGGGAGTCCC CGAAACCGCA
GTGCTGCGGG CCGAAATCGA CGCTCACAGC TGA
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| Protein sequence | MEYRILGPLE VVRDGVPIAI KGRHQPRLLA MLLLEAGQTV TLSRLVDVLW DEEPPETARR
QAQNYMAALR RTLGTSNPIE VVGEGYRFAA GDSFVDSVRF EELNHLARHD AREGRHAKAL
PSFDEALGLW RGPTLAGLSA RWLESRSRRL DDLRLGMIED RAASLLELGR HADVVGELAE
LLAEKPYRQQ AARHLMLALY RCGRGAEALE VFGALRTRLA EELGIDPNPM VRELHGRILR
EDASLAVPRP EMSIVAAKPE ILVPAQLPAG VATFTGRDEE LAELDRLFDS GAAVTVLSAI
SGGGGVGKTA LAVHWSRNRT ERFPDGQLYV NLRGFDHNEP LKPIDALSRF LRALGTPSAK
IPAETEEASA LFRSVMNGRN MLVVLDNART AEQVRPLLPG GQDNAVLVTS RNRLASLAAL
NDAKLMALDV LSLTESLELL AELIGADRVN ADPDSARRLV ELCGHLPLAL RIAAASLAAR
SDGSISNLAS ELDSVSRLEI LSIEGDPYSA VTATFDLSVG ALSIEARDLF LRLGMIPGED
IAEGLAVEVS GHQEDRAKDL LQGLVSAHLL ETHVPGRYRF HDLVRIYAHR CAIDKLSSSI
CESIIDTLVA WYFQNRGRIS PDEIPNVVTT CKLLNKHPEM WRVAYTLSMI THHGLGLKVA
RDQCEIALRI AEVYNDRHGQ ARMLSALGGI QYALGETELS IELSRKSVAT IDPNVDSRTY
GDLCNNLGIR LSWSGRYREA EEWLVKSLQP GYMAEGVHFE LVRVLNLGTV YRALGRYGDA
LAYLDRSAAL LSKLESRSIA ASIYLARALL ENDRGRHRKA WAYAQEALLA GQQCKSVRSI
VIALQQRGLA EFGCGKIERA REDYLASTVR ANEHGMSTVE RRNYCFLADL ECFAGDNSRA
VKYLESAAAV EVLQPPRYLV AEMLRVDSNV RLKLNAYRHA VSTGRKAAAL FASMPDPLRH
ARSLVIVARA YEGLADYNKA ADARQEALAI FTRLGVPETA VLRAEIDAHS
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