Gene Snas_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0821 
Symbol 
ID8882005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp867445 
End bp868701 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content72% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003509626 
Protein GI291298348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.707747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC ACGCGCGCAC GCACACGTAT CCCGAATCGG GGGTTCCGGA CCCGGACGCG 
GCACCGCCGC CGCCCGCCGA GATCCTGGCC GTCCCCACCG ACGGGCTCGG CGCGGGACCC
AGCGAACCCA AGCGGGTCAT CGTCATCGGC GCCGGGATCG CCGGACTGGC CGCGGCCTTC
GAACTGGCCC GGGCCGGACA CCAGCCGATC GTCCTGGAGG CCCGCGACCG GGTCGGCGGC
CGGATCCACA CGATCCGGGA CTTCGCCCCC GGCCTGTACG CCGAGGCCGG TGCGACCCGG
ATCCCCCACA CGCACGCGCT GACGCTTCGC TACTGCGAGC TGTTCCACCT GAAGCTGCGC
CCCTTCGTCA TGGGCAACCC ACGGGCGCTG GCGCACCGGG ACGGCCGGAC CGTGACGATG
GCCGAGGCGG AACGCGGCGA CGGCCGGGAC TGGGCGCAGA CCGCCGCCGG GGACGCGCGG
GAGATCGAGG GCGGCACCGA CCGGCTCGTC CGGGCCTTCT TCCACAAGGT GTCCCGGCAC
GTGCGCATGG GCGCCGAGGT GTTGGCGATC GAGCAGGACG AGGAGGTCGT GTCGGTGCAC
TTCCGCACCC ACGCGGGCCG GTTCACCGTC CACGGCGACC ACGCCGTGTG CACACTGCCG
CTGCCGGTGA TGTCCAACGT GGATATCAAC CTGTCGCCCG ACAAACGCCG CGCCGTCCGG
GAGGTGCACT ACAACCCCGC CACCGCGGTC CTGCTGCAAG TGCGGCACCG GTTCTGGGAA
CACCCGAAGT ACGACATCGT CGGCGGCACC ACCGTGACCG ACCTGTCGAT CCGCCGGATC
GTCTACCCGT CCTATTCGGA CCCCGCCACG CCGCGCGGCA TCCTGCTGGC CTCGTACACC
TGGGGACCCG ACGCGCTGCG CTGGGCGTCG ATGGACCCCG ACACCCGCGT CGAACGCGCC
ATCGCCGACG TCGCGCGGAT CCACCCCGAG ATCGTCGAGG AGTTCGAACT GGGCGTCAGC
GAGGACTGGC TGAACGACCG GCACGCCGCG GGCGCCCTCG CCCAGTTCGA ACCCGGCCAG
CTGACCCGGC TGTACCCGCA CCTCGTCGCC CCCGAGGGCC GGATCCACTT CGCGGGCGAA
CACTGTTCCC GCCACCACGG CTGGATCCAG GGAGCCCTGG AATCGGCGCT GCGGGTCGCG
GGCGAGATTC ACAGGGCGCC AGTGGCGGCC TCAGCGCGGG CGGGCCGGTC AGGTTAG
 
Protein sequence
MMDHARTHTY PESGVPDPDA APPPPAEILA VPTDGLGAGP SEPKRVIVIG AGIAGLAAAF 
ELARAGHQPI VLEARDRVGG RIHTIRDFAP GLYAEAGATR IPHTHALTLR YCELFHLKLR
PFVMGNPRAL AHRDGRTVTM AEAERGDGRD WAQTAAGDAR EIEGGTDRLV RAFFHKVSRH
VRMGAEVLAI EQDEEVVSVH FRTHAGRFTV HGDHAVCTLP LPVMSNVDIN LSPDKRRAVR
EVHYNPATAV LLQVRHRFWE HPKYDIVGGT TVTDLSIRRI VYPSYSDPAT PRGILLASYT
WGPDALRWAS MDPDTRVERA IADVARIHPE IVEEFELGVS EDWLNDRHAA GALAQFEPGQ
LTRLYPHLVA PEGRIHFAGE HCSRHHGWIQ GALESALRVA GEIHRAPVAA SARAGRSG