Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0821 |
Symbol | |
ID | 8882005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 867445 |
End bp | 868701 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | amine oxidase |
Protein accession | YP_003509626 |
Protein GI | 291298348 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.707747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATC ACGCGCGCAC GCACACGTAT CCCGAATCGG GGGTTCCGGA CCCGGACGCG GCACCGCCGC CGCCCGCCGA GATCCTGGCC GTCCCCACCG ACGGGCTCGG CGCGGGACCC AGCGAACCCA AGCGGGTCAT CGTCATCGGC GCCGGGATCG CCGGACTGGC CGCGGCCTTC GAACTGGCCC GGGCCGGACA CCAGCCGATC GTCCTGGAGG CCCGCGACCG GGTCGGCGGC CGGATCCACA CGATCCGGGA CTTCGCCCCC GGCCTGTACG CCGAGGCCGG TGCGACCCGG ATCCCCCACA CGCACGCGCT GACGCTTCGC TACTGCGAGC TGTTCCACCT GAAGCTGCGC CCCTTCGTCA TGGGCAACCC ACGGGCGCTG GCGCACCGGG ACGGCCGGAC CGTGACGATG GCCGAGGCGG AACGCGGCGA CGGCCGGGAC TGGGCGCAGA CCGCCGCCGG GGACGCGCGG GAGATCGAGG GCGGCACCGA CCGGCTCGTC CGGGCCTTCT TCCACAAGGT GTCCCGGCAC GTGCGCATGG GCGCCGAGGT GTTGGCGATC GAGCAGGACG AGGAGGTCGT GTCGGTGCAC TTCCGCACCC ACGCGGGCCG GTTCACCGTC CACGGCGACC ACGCCGTGTG CACACTGCCG CTGCCGGTGA TGTCCAACGT GGATATCAAC CTGTCGCCCG ACAAACGCCG CGCCGTCCGG GAGGTGCACT ACAACCCCGC CACCGCGGTC CTGCTGCAAG TGCGGCACCG GTTCTGGGAA CACCCGAAGT ACGACATCGT CGGCGGCACC ACCGTGACCG ACCTGTCGAT CCGCCGGATC GTCTACCCGT CCTATTCGGA CCCCGCCACG CCGCGCGGCA TCCTGCTGGC CTCGTACACC TGGGGACCCG ACGCGCTGCG CTGGGCGTCG ATGGACCCCG ACACCCGCGT CGAACGCGCC ATCGCCGACG TCGCGCGGAT CCACCCCGAG ATCGTCGAGG AGTTCGAACT GGGCGTCAGC GAGGACTGGC TGAACGACCG GCACGCCGCG GGCGCCCTCG CCCAGTTCGA ACCCGGCCAG CTGACCCGGC TGTACCCGCA CCTCGTCGCC CCCGAGGGCC GGATCCACTT CGCGGGCGAA CACTGTTCCC GCCACCACGG CTGGATCCAG GGAGCCCTGG AATCGGCGCT GCGGGTCGCG GGCGAGATTC ACAGGGCGCC AGTGGCGGCC TCAGCGCGGG CGGGCCGGTC AGGTTAG
|
Protein sequence | MMDHARTHTY PESGVPDPDA APPPPAEILA VPTDGLGAGP SEPKRVIVIG AGIAGLAAAF ELARAGHQPI VLEARDRVGG RIHTIRDFAP GLYAEAGATR IPHTHALTLR YCELFHLKLR PFVMGNPRAL AHRDGRTVTM AEAERGDGRD WAQTAAGDAR EIEGGTDRLV RAFFHKVSRH VRMGAEVLAI EQDEEVVSVH FRTHAGRFTV HGDHAVCTLP LPVMSNVDIN LSPDKRRAVR EVHYNPATAV LLQVRHRFWE HPKYDIVGGT TVTDLSIRRI VYPSYSDPAT PRGILLASYT WGPDALRWAS MDPDTRVERA IADVARIHPE IVEEFELGVS EDWLNDRHAA GALAQFEPGQ LTRLYPHLVA PEGRIHFAGE HCSRHHGWIQ GALESALRVA GEIHRAPVAA SARAGRSG
|
| |