Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0667 |
Symbol | |
ID | 8881851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 700376 |
End bp | 702160 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003509473 |
Protein GI | 291298195 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.144802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.533045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGACGG TGTCCGAACT GGAGAACGCC AGACCCGAAC AGCTGGAGGG CAGTGCCAGG GCGGCCCGGA AGGTCTCCGT GGACCTGGGC GAGCACATCA ACCGCACCAG CCGGGCGTGG TCGGCGTTGC AGGCGACCTG GTACGGCCCC GACGCTCACA CGGCGGGCGC GAACCTGCAC CACCATCGCC TGGACCTGAC CCAGGCCCGA CTCGCCTACG GCCGCATCGA TTCCGCGCTG TCGGACTTCG CCGGGGAACT GCGGCAGGCA CAGAAGCTGC TGAAGTCGGC GCTGGCCCGT GCCGACGGCA TCCACGCCAC TGTCACCGAC GACGGGACCG TCCGGGTCAG CGACGAGGTC ATGAAGGGCA AGTCCTCCGC CGAGCGCGCG AACATCAAGG CGCAGTTGAA GACCATCGCC GACGACATCG CCAAGGCGCG CACCAGGGCG GTCACCGCCG ACCGGCAGGC GGTGGCGCAG CTGACGGGCG TGTCCATGCC CGACGGTCCC GACATCGACG CGACGCCGCT GTTGAAGGAC GTCCCCACCG ATCCGCAGCT GGTGAAGAAG TGGTGGGACG GTTTGAATCC GGATCAGCGC GTGGCGCTGA TCACCGCCGA CCCCAAGCGG ATCGGCGGAC TGGACGGCGT CCCGGCCATC GACCGGGATC AGGCGAACCG CTTGTACCTG GACAACGAGC AGGAGCAGCT CGCGGCGCGC AAGCGGGCGG CGCAGGCCCG GATCGCCGAG ATCCAGCGGC TCGGCGACCA GGGCAAGGGA AGCCCGGCGC TACTGAGCGA GGCACTCGAG CTCCAGAAGA AGATCGCCGG GTTCGACGAG AAGGCGAAGC AGCTCAACCA CTTCGAGGAG AAGCTCAACG AGTCCGATCC CCGGTCGTCC ACCGAACGCC GGTTCCTGCT CAAGTTCGAT CCGGCCGGTG ACGGGCGGGC CATCGTGGCG GTGGGCAATC CCGACACCGC CGACAACGTC GCGACCTTCG TTCCCGGCAC CGGGACCACG ATCGCCGACG ACACCAACCT GTTCAACCGG GGCGCGATCA TGCAGAGCGA CGCCACCCTG CGCGACCCCA CCGCCACCAC CTCGGTCATC ACCTGGCTGG ACTACGAGGC GCCCTCGTTC GTCTCCTTCG GACCCGAACC GGGACCGGCG ACCACCGGAA GCGCGGAGAC CGCCACCGAC CTGGCGCAGT TCCAGAACTC ACTGCGGTTC ACCCATGAGG GACCGCGTTC CCGCAACACC ATCCTGGGAC ACAGTTACGG TGCGACGGTC GTGGGTTACG TCGCCGACCG GCAGGGACTG GACGTCGACA ACATCGTGTT CGTGGCCAGT CCCGGCAGCG GGCAGGGCCT CGCCGGAGAC GCCGGGGACT TCCGCAAGGG CCTCGACAAG GACAACCGGC TGCGGGTTCC CACGGTCTTC GCCACCCGGG CCGAGAACGA CCCGATCCAG GCGGTCTCGG GTGCCGGTGG CGGCCTCGCC GGGACCAACG GTCCCGACCC GACCGAGGAG GGCTTTGGTG CGAAGGTCTT CCGCAGCGAC CCGGGAACGA CCCTGCTGCC TCGTCCTCAG GGCGACAACC GCGGCGAGTG GGGCTACGGC GGCGCCCACT CCGACTACTG GAACGGCCCC AACAACCCCG AGTCGATCTA CGAACGGCCG CAGGTCAATG AGGCCCGCGA CAACTTCTCC CGGATCATCA CCGGCATGGA CGATCAGGTC ACGGTGGACA CTCCGACGGT GCATCGAGGA CGGATCGCGT ACTAG
|
Protein sequence | MVTVSELENA RPEQLEGSAR AARKVSVDLG EHINRTSRAW SALQATWYGP DAHTAGANLH HHRLDLTQAR LAYGRIDSAL SDFAGELRQA QKLLKSALAR ADGIHATVTD DGTVRVSDEV MKGKSSAERA NIKAQLKTIA DDIAKARTRA VTADRQAVAQ LTGVSMPDGP DIDATPLLKD VPTDPQLVKK WWDGLNPDQR VALITADPKR IGGLDGVPAI DRDQANRLYL DNEQEQLAAR KRAAQARIAE IQRLGDQGKG SPALLSEALE LQKKIAGFDE KAKQLNHFEE KLNESDPRSS TERRFLLKFD PAGDGRAIVA VGNPDTADNV ATFVPGTGTT IADDTNLFNR GAIMQSDATL RDPTATTSVI TWLDYEAPSF VSFGPEPGPA TTGSAETATD LAQFQNSLRF THEGPRSRNT ILGHSYGATV VGYVADRQGL DVDNIVFVAS PGSGQGLAGD AGDFRKGLDK DNRLRVPTVF ATRAENDPIQ AVSGAGGGLA GTNGPDPTEE GFGAKVFRSD PGTTLLPRPQ GDNRGEWGYG GAHSDYWNGP NNPESIYERP QVNEARDNFS RIITGMDDQV TVDTPTVHRG RIAY
|
| |