Gene Snas_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0667 
Symbol 
ID8881851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp700376 
End bp702160 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509473 
Protein GI291298195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.144802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.533045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGG TGTCCGAACT GGAGAACGCC AGACCCGAAC AGCTGGAGGG CAGTGCCAGG 
GCGGCCCGGA AGGTCTCCGT GGACCTGGGC GAGCACATCA ACCGCACCAG CCGGGCGTGG
TCGGCGTTGC AGGCGACCTG GTACGGCCCC GACGCTCACA CGGCGGGCGC GAACCTGCAC
CACCATCGCC TGGACCTGAC CCAGGCCCGA CTCGCCTACG GCCGCATCGA TTCCGCGCTG
TCGGACTTCG CCGGGGAACT GCGGCAGGCA CAGAAGCTGC TGAAGTCGGC GCTGGCCCGT
GCCGACGGCA TCCACGCCAC TGTCACCGAC GACGGGACCG TCCGGGTCAG CGACGAGGTC
ATGAAGGGCA AGTCCTCCGC CGAGCGCGCG AACATCAAGG CGCAGTTGAA GACCATCGCC
GACGACATCG CCAAGGCGCG CACCAGGGCG GTCACCGCCG ACCGGCAGGC GGTGGCGCAG
CTGACGGGCG TGTCCATGCC CGACGGTCCC GACATCGACG CGACGCCGCT GTTGAAGGAC
GTCCCCACCG ATCCGCAGCT GGTGAAGAAG TGGTGGGACG GTTTGAATCC GGATCAGCGC
GTGGCGCTGA TCACCGCCGA CCCCAAGCGG ATCGGCGGAC TGGACGGCGT CCCGGCCATC
GACCGGGATC AGGCGAACCG CTTGTACCTG GACAACGAGC AGGAGCAGCT CGCGGCGCGC
AAGCGGGCGG CGCAGGCCCG GATCGCCGAG ATCCAGCGGC TCGGCGACCA GGGCAAGGGA
AGCCCGGCGC TACTGAGCGA GGCACTCGAG CTCCAGAAGA AGATCGCCGG GTTCGACGAG
AAGGCGAAGC AGCTCAACCA CTTCGAGGAG AAGCTCAACG AGTCCGATCC CCGGTCGTCC
ACCGAACGCC GGTTCCTGCT CAAGTTCGAT CCGGCCGGTG ACGGGCGGGC CATCGTGGCG
GTGGGCAATC CCGACACCGC CGACAACGTC GCGACCTTCG TTCCCGGCAC CGGGACCACG
ATCGCCGACG ACACCAACCT GTTCAACCGG GGCGCGATCA TGCAGAGCGA CGCCACCCTG
CGCGACCCCA CCGCCACCAC CTCGGTCATC ACCTGGCTGG ACTACGAGGC GCCCTCGTTC
GTCTCCTTCG GACCCGAACC GGGACCGGCG ACCACCGGAA GCGCGGAGAC CGCCACCGAC
CTGGCGCAGT TCCAGAACTC ACTGCGGTTC ACCCATGAGG GACCGCGTTC CCGCAACACC
ATCCTGGGAC ACAGTTACGG TGCGACGGTC GTGGGTTACG TCGCCGACCG GCAGGGACTG
GACGTCGACA ACATCGTGTT CGTGGCCAGT CCCGGCAGCG GGCAGGGCCT CGCCGGAGAC
GCCGGGGACT TCCGCAAGGG CCTCGACAAG GACAACCGGC TGCGGGTTCC CACGGTCTTC
GCCACCCGGG CCGAGAACGA CCCGATCCAG GCGGTCTCGG GTGCCGGTGG CGGCCTCGCC
GGGACCAACG GTCCCGACCC GACCGAGGAG GGCTTTGGTG CGAAGGTCTT CCGCAGCGAC
CCGGGAACGA CCCTGCTGCC TCGTCCTCAG GGCGACAACC GCGGCGAGTG GGGCTACGGC
GGCGCCCACT CCGACTACTG GAACGGCCCC AACAACCCCG AGTCGATCTA CGAACGGCCG
CAGGTCAATG AGGCCCGCGA CAACTTCTCC CGGATCATCA CCGGCATGGA CGATCAGGTC
ACGGTGGACA CTCCGACGGT GCATCGAGGA CGGATCGCGT ACTAG
 
Protein sequence
MVTVSELENA RPEQLEGSAR AARKVSVDLG EHINRTSRAW SALQATWYGP DAHTAGANLH 
HHRLDLTQAR LAYGRIDSAL SDFAGELRQA QKLLKSALAR ADGIHATVTD DGTVRVSDEV
MKGKSSAERA NIKAQLKTIA DDIAKARTRA VTADRQAVAQ LTGVSMPDGP DIDATPLLKD
VPTDPQLVKK WWDGLNPDQR VALITADPKR IGGLDGVPAI DRDQANRLYL DNEQEQLAAR
KRAAQARIAE IQRLGDQGKG SPALLSEALE LQKKIAGFDE KAKQLNHFEE KLNESDPRSS
TERRFLLKFD PAGDGRAIVA VGNPDTADNV ATFVPGTGTT IADDTNLFNR GAIMQSDATL
RDPTATTSVI TWLDYEAPSF VSFGPEPGPA TTGSAETATD LAQFQNSLRF THEGPRSRNT
ILGHSYGATV VGYVADRQGL DVDNIVFVAS PGSGQGLAGD AGDFRKGLDK DNRLRVPTVF
ATRAENDPIQ AVSGAGGGLA GTNGPDPTEE GFGAKVFRSD PGTTLLPRPQ GDNRGEWGYG
GAHSDYWNGP NNPESIYERP QVNEARDNFS RIITGMDDQV TVDTPTVHRG RIAY