Gene Snas_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0645 
Symbol 
ID8881829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp678880 
End bp679542 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003509451 
Protein GI291298173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.691779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG TGCTGCTGGC CGACGACCAG GTCCTGATGC GCGGCGGCTT CCGAGCCCTT 
TTGGACGCCG AGGACGACAT CAGCGTCGTG GCGGAGGCGG CCAACGGCGA GGAGGCGGTT
TCGCTTGCGG CCGAACACGT CCCGGACGTG GCGCTCATCG ACATCCAGAT GCCGGGGACC
GGTGGCATCG AGGCGGCTCG CCGCATCGCG GCCCGACCGG AGCTGGCGTC GGTGCGGGTG
GTCATGCTGA CCAACTACGG CTTCGACGAG TACGTGTACA ACGCGCTGCG CGCCGGGGCG
TCGGGGTTCC TGGTCAAGGA CATCGAACCG GCGGAGCTGC TGCACGCGGT GCGGCAGGCG
GCTCGCGGGG ATGCTCCACT GTCGCCGGAC GTGGCCCGGA GGTTGATGCG GGACTTCGCT
TCCCGGCCGC TGTCACCGAA TCCGGTGGAC GACGAGCGGC TGACGAATCG GGAGCGGGAG
GTCGTGGTGC TGGCGGCACA GGGGCTGAAC AACGAGGAGA TCGCGGAGCG GTTGGTGATC
AGCCCGACGA CGGCGAAGAC GCATATCAGC CGGGCGATGA TCAAGCTGGC CTGCCGGGAT
CGGACGCAGC TGGTGGTCTA CGCGTATGAG TCGGGGTTGA TCACTCCCAA GCAGGCGTCG
TGA
 
Protein sequence
MIRVLLADDQ VLMRGGFRAL LDAEDDISVV AEAANGEEAV SLAAEHVPDV ALIDIQMPGT 
GGIEAARRIA ARPELASVRV VMLTNYGFDE YVYNALRAGA SGFLVKDIEP AELLHAVRQA
ARGDAPLSPD VARRLMRDFA SRPLSPNPVD DERLTNRERE VVVLAAQGLN NEEIAERLVI
SPTTAKTHIS RAMIKLACRD RTQLVVYAYE SGLITPKQAS