Gene Snas_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0625 
Symbol 
ID8881809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp661578 
End bp662228 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003509432 
Protein GI291298154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.732521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CGGTGCTGCT GGCCGACGAC GACCCGCTGG CCCGCACGGG CCTGCGCACC 
CTGGTCTCCG CGCAACCCGA CATCGACGTG ATCGCCGAGG CCGCCGACGG CACCCAGGTC
CTACCCCTGG TGCGTCGCCT TCGCCCCGAC GTGGTCCTGA TGGACGTCCG CATGCCGGAC
ATGGACGGCA TCGAAGCCAC CCGTCGACTC CGCCGTGACC TGACCGAACC ACCCAAAGTG
GTCGTCATAA CCACGTTCGA GAACGACGAA TACGTCTTCG ACGCCCTCCG CGCGGGAGCC
AACGGCTTCG TCCTCAAACG GGCCCCGGCC ACCGAGATCG CCCACGCCAT CCGCACCGTG
GCCTCGGGGG ACGCCCTACT GTTCCCCGAG GCCATCCGGG CCCTGGCCGC CGCCCGTCCC
GCCCCACCGG GCAACCCTCA CGGCCCCATC GCCCTCACCG CCCGCGAAGC CGAAGTCCTG
CGGCTCATGG CAACCGGACT GTCCAACCAA GACATAGCAA CCCACCTCAC CGTGAGCCTC
GAAACCATCA AAACCCACGT AGGCAGCGTC CTCACCAAAC TCGGGGCCGC CAACCGAACC
CAAGCCGTCA TCATCGCCTA CGAATCCGGC TTCGTAACCC CCGGCGGCTA A
 
Protein sequence
MTITVLLADD DPLARTGLRT LVSAQPDIDV IAEAADGTQV LPLVRRLRPD VVLMDVRMPD 
MDGIEATRRL RRDLTEPPKV VVITTFENDE YVFDALRAGA NGFVLKRAPA TEIAHAIRTV
ASGDALLFPE AIRALAAARP APPGNPHGPI ALTAREAEVL RLMATGLSNQ DIATHLTVSL
ETIKTHVGSV LTKLGAANRT QAVIIAYESG FVTPGG