Gene Snas_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0615 
Symbol 
ID8881799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp650706 
End bp651656 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLactate/malate dehydrogenase 
Protein accessionYP_003509422 
Protein GI291298144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA AGGTCACCGT CGTCGGCGCC GGTTTCTACG GATCCACCAC GGCGCAGCGA 
CTGGCCGAGT ACGACGTCTT CGACACCGTC GTCCTCACCG ACATCATCGA CGGCAAGCCG
GAGGGGCTGG CGCTGGACCT GAACCAGTCG CGCTCCATCG AGGGCTACGA GACGAAGGTG
ATCGGCGCCA CCACCGGCAC CGACGGCAGC GGCTACGAGG TCATCTCCGG TTCCGACATC
GTGATCATCA CCGCCGGGCT GCCGCGCAAG CCGGGCATGA GCCGCATGGA CCTGCTGGAG
GTCAACGCCA AGATCGTGCG CGGCGTCGCC GAGAACGTCG CCAAGTACGC TCCCGAGGCC
GTCATCATCG TGGTGTCCAA CCCGCTGGAC GAGATGACCG CGCTGACCCA GATCGCGTCC
CAGTTCCCGA AGAACCGGGT CATGGGCCAG GCCGGAATGC TCGACACCGC CCGGTTCACC
CACTTCGTCG CCGAGGAGCT GAACGTCCCG GTGGCCTCGG TCAAGACGCT GACCCTCGGA
TCGCACGGCG ACACCATGGT TCCGGTGCCG TCGCAGTGCA CCGTGGACGG CAAGCCGCTG
TCGGAGGTCC TGGACGCCGA CAAGATCGAG TCGCTCGTGG ACCGCACCCG TAAGGGCGGT
GCCGAAGTGG TGGCGCTGCT GAAGACCGGT TCGGCCTTCT ACGCGCCCTC GGCCGCCGCG
GCCCGGATGG CTCGCGCGGT CGCCGAGGAC TCCGGCGCCG TCATGCCGGT CTGCGCCTGG
GTCGACGGTG ACTACGGCAT CTCCGGCGTC TACCTCGGCG TCAACGCCGA GATCGGCGCC
ACCGGTGTCC GCAAGGTCGT CGAGACCCCG CTGACCGACT CGGAGCTGGC CGGTCTCAAG
GAGGCCGCCG AGGCCGTGCG CGCCAAGCAG GGCGACGTCG CGAACCTCTA G
 
Protein sequence
MGKKVTVVGA GFYGSTTAQR LAEYDVFDTV VLTDIIDGKP EGLALDLNQS RSIEGYETKV 
IGATTGTDGS GYEVISGSDI VIITAGLPRK PGMSRMDLLE VNAKIVRGVA ENVAKYAPEA
VIIVVSNPLD EMTALTQIAS QFPKNRVMGQ AGMLDTARFT HFVAEELNVP VASVKTLTLG
SHGDTMVPVP SQCTVDGKPL SEVLDADKIE SLVDRTRKGG AEVVALLKTG SAFYAPSAAA
ARMARAVAED SGAVMPVCAW VDGDYGISGV YLGVNAEIGA TGVRKVVETP LTDSELAGLK
EAAEAVRAKQ GDVANL