Gene Snas_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0590 
Symbol 
ID8881773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp620785 
End bp621558 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509397 
Protein GI291298119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AATCCACTGT GGATCCACAG GTGCAGATCC GAGGGCTGCA CAAGAGCTTC 
GGCAAGCTCA AGGTCCTGAA GGGCATCGAC ATCTCGATCC GGAGCGGGGA GGTCGTGTGT
GTCATCGGCC CCTCGGGTTC CGGCAAGTCG ACGCTGCTGC GGTGCGTGAA CCTGCTGGAG
CAGCCCACCG CCGGTGAGAT CGTCGTCGAC GGTTACCTGC TGACCGACCG CGACGCCGAC
CTGAACCTGG CGCGGCGCCA CATCGGCATG GTCTTCCAGC AGTTCAACCT GTTCCCGCAC
CTGAACGTCC TCGACAACGT GGCGGTGGCC CAGCGCAAGG TCCTCAAGAC CCCGAAGGCC
ACCGCGCGCA AGGTCGCGAT GGAGCAGCTG GAGAAGGTCG GCGTCGCCGA GAAGGCCAAG
GAGTTCCCGG CCCGGCTGTC GGGTGGTCAG CAGCAGCGGG TCGCCATCGC GCGGGCGCTG
TCGATGGAAC CGGACCTGAT GCTGTTCGAC GAGCCGACCT CGGCGCTGGA CCCGGAGCTG
GTCGGTGACG TGCTGACCGT CATGCGGGAG CTGGCCGCCG ACGGCATGAC CATGATGGTC
GTGACCCACG AGATGGGTTT CGCGCGCGAC GTCGCCGACC GGGTGGTGTT CATGGACGGT
GGCGTGATCG TCGAGGAGGG TCAGCCCGCC GACGTGCTGG AGAACCCCAG TGCCGAACGC
ACCCGGGAGT TCCTGAAGCG GGTGCTGGAC CCCACGCACG CCGACGAAGC CTGA
 
Protein sequence
MSEQSTVDPQ VQIRGLHKSF GKLKVLKGID ISIRSGEVVC VIGPSGSGKS TLLRCVNLLE 
QPTAGEIVVD GYLLTDRDAD LNLARRHIGM VFQQFNLFPH LNVLDNVAVA QRKVLKTPKA
TARKVAMEQL EKVGVAEKAK EFPARLSGGQ QQRVAIARAL SMEPDLMLFD EPTSALDPEL
VGDVLTVMRE LAADGMTMMV VTHEMGFARD VADRVVFMDG GVIVEEGQPA DVLENPSAER
TREFLKRVLD PTHADEA