| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0580 |
|---|
| Symbol | |
|---|
| ID | 8881763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 610524 |
|---|
| End bp | 611204 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003509387 |
|---|
| Protein GI | 291298109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGCG TACTCGTAGT CGAAGACGAG GAATCGTTCT CCGACGCGCT TTCGTACATG
CTGCGCAAGG AGGGCTTCGA AGTGGCGGTC GCCGCCACCG GAAACGAGGC TCTCAAGGAA
TATGAGAAGG CCGGAGCCGA CATCGTCCTG CTGGACCTGA TGCTGCCGGA GAAGTCGGGA
ACCGAGGTGT GCCGCGAACT ACGCACCACG TCCAATGTGC CCATCATCAT GGTGACCGCG
CGCGACAGCG AGGTCGACAA GGTCGTGGGG CTGGAGATCG GCGCCGACGA CTACATCACC
AAGCCCTACT CGCCCCGCGA GCTCGTCGCC CGGATCCGCG CGGTGCTGCG CCGCAACGCC
GAACCCACCG ACCCGATGGT GACGGTGCTG GAATCCGGCC CGGTGCGCAT GGACGTCGAC
CGGCACGTGG TGTCGGTGGG CGGCGCCGAG ATCCCGTTGC CGCTCAAGGA GTTCGAGCTG
CTCGAGATGT TCCTGCGCAA CTCCGGCCGA GTGCTGACCC GCGGCCAGCT CATCGACCGC
GTCTGGGGCG CCGACTACGT CGGCGACACC AAGACCCTCG ACGTGCACGT GAAACGGCTG
CGCTCCAAGA TCGAGACCGA GCCCGGTCGT CCCCGCCACC TCGTGACCGT TCGGGGCCTG
GGCTACAAGT TCGAGTCCTA G
|
|---|
| Protein sequence | MTRVLVVEDE ESFSDALSYM LRKEGFEVAV AATGNEALKE YEKAGADIVL LDLMLPEKSG
TEVCRELRTT SNVPIIMVTA RDSEVDKVVG LEIGADDYIT KPYSPRELVA RIRAVLRRNA
EPTDPMVTVL ESGPVRMDVD RHVVSVGGAE IPLPLKEFEL LEMFLRNSGR VLTRGQLIDR
VWGADYVGDT KTLDVHVKRL RSKIETEPGR PRHLVTVRGL GYKFES
|
|---|
| |