Gene Snas_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0531 
Symbol 
ID8881714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp554233 
End bp554886 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509338 
Protein GI291298060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.489053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC AGAACCCCCG ACCGTCCCCG ACGACCCGCA TGCTGCTGTA TTGCGGCGCG 
ATCGGCGGCC CGTTGTTCAG TCTCGTCGTT GTCGCACAGG AGCTGACCCG TCCGGGTTTC
GATCCGAAGG TCAACGCGTT GAGCCAGTTG TCGACCGGCG AGGGCGGCTG GCTGCAGATC
GCCAACTTCG TCGTCGCGGG TCTGCTCGTC ACGGCCTCGG CGGTCGGCAT CCGCCGTACC
GTGCGCACCG GCCCCGGGCG CACCTGGCTT CCGATCCTGT TCGGCATCTA CGGCGTGGGA
CTGGTGTGGG GCGGTGTCTT CGTCACCGAC CCGGCCTTCG GCTACCCGGC CGGGACCCCG
CAGGGCGCTC CCGAGACGCT CACCTGGCAT GGCATCCTGC ACGGCCTCGC CCCGGCCGCC
ATCGGCGTCG CGTTGATCGC GGCGAGCATC ATCGTCGCCC GCCGGTACCG CTGGCAACAA
CGCGGCGCCG CCGCCGTGGT CAGCTGGGTG GTTCCCGTGG TCTACCTGCT GTCCAGCGGC
CTGGCCTTCG GGCTCGGCGA CTTCCGGTAC CTGCTGGCCG GGGGGATCAT CATCTGGGTG
TGGGCCGCCG CCGTCACCGC CGACCTGTCG CGCGTGCGCG CCGCGACCGA ATAA
 
Protein sequence
MTTQNPRPSP TTRMLLYCGA IGGPLFSLVV VAQELTRPGF DPKVNALSQL STGEGGWLQI 
ANFVVAGLLV TASAVGIRRT VRTGPGRTWL PILFGIYGVG LVWGGVFVTD PAFGYPAGTP
QGAPETLTWH GILHGLAPAA IGVALIAASI IVARRYRWQQ RGAAAVVSWV VPVVYLLSSG
LAFGLGDFRY LLAGGIIIWV WAAAVTADLS RVRAATE