| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0477 |
|---|
| Symbol | |
|---|
| ID | 8881660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 497403 |
|---|
| End bp | 498803 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | FG-GAP repeat protein |
|---|
| Protein accession | YP_003509285 |
|---|
| Protein GI | 291298007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00503985 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT CACGTTTGTC CCCCCGTGCC CGCAAGGCGG GGGTGATCAC ACTGGCCGTA
GCGGTCGGCG TGACGACGGT GGGAGCAGCG GCCGTGGCGT ACGCCGACCC CGCCGAATCC
TCCGTGCCCA CGTCGTCGGA CTTCGACGGC GACGGCAAGG ACGACCTGGC CATGTCGGCG
CAGAAGACCG ACGAAGCCGC CGAGGACTCG GTCGTCATCG ACTACACCAC CGGTCTGGCG
AACAAGGAGC TGTACCCGGA GTCGGCCTAC GGCACCGACG GTTTCGGGGT GGGACTGGCC
GCGGGGGACC TCAACGGCGA CGGCTTCGAC GACCTCGCGG TCGGCTGCGT CAACTGTGAC
TGGGAATGGG GCGGCGCGAC CGTCTCCATC TACAACGGCT CCGCCGAGGG CCTCAAACCC
GACTCGGCGG TCAACGCCGA GGTCGGCGAC CCGACCTACG CCGTCGGCAT CGGTGAACTC
AACGGCGGGG GAAGCCTGGA CGTCGGCTCG ACTCGGCTGG GCGACGCCAG CGCGGTCTCC
TCGCGCGGCG ACGACGGCTG GTGGTCCGAC AAGTGGGTCA ACACCGGGAT GCCGACCGAT
GAGAACCGGC TGGGCTCGGT GGCCATCGGC GACGTCAACG GCGACGGCAA GGACGACCTG
GTCATCGGCA CCCCCACCGC CGACGGTGGT TCGATCACGC TGTTCCCCGG CCCGGTGACC
GAGGGCAAGA AGGACACCGT CAAGGCCGTC GAGCTCAGCC CGACGCTGCG CGACCTGGGC
GCCTCGCTGG CCGTCACCGA CGTGACCGGC GACGGTCTGG CCGACGTCAT CGCCGGGGCC
CCGACCTCGA CGGTCGGCGG CACCAGCTGC GGCGCGGTCC AGCTGCTGAT CGGCAAGACC
AACGGCATTG CCGCCGACTT CAGTCAGCGG CTCACCCAGG AGAGCGCCAA CATCCCGGGT
GTCTGCGAAG CCGGTGACGA CTGGGGCCGT TCGGTGGCCG CGGGCAACGT CGACGGTGAC
GCCGGCGCCG AGGTCGTGGT CGGGGTCCCC GGCGAGGGCA TCGACTCGCT GGGCAAGGCC
GGTACCTACA CCACGCTTCA GTCCACTTCG ACCGGTCTGA CCGGCACCGG TTCGTTCGGG
GTCTCGCAGG CCACCGCCAA CGTCCCGGGA ACCGCGGAGT CCGGTGACGG CTTCGCCTCC
GCGCTGGCGC TGCGGGACGT CAACGACGAC GGCCGCATGG ACGTCGTCAT CGGTGCCCCC
ACCGAGGACG TCTCCACCGT CAAGGACGCC GGACAGGTCG TCACGGCGCT GTCCAGCGCC
ACCGGCGCGC CCGCCGCGGG CACCACCGAG GTGACCGGCA ACAAGTACGG GCTCAAGCGA
TTGGGCTGGG AACTGGCGTA G
|
|---|
| Protein sequence | MRKSRLSPRA RKAGVITLAV AVGVTTVGAA AVAYADPAES SVPTSSDFDG DGKDDLAMSA
QKTDEAAEDS VVIDYTTGLA NKELYPESAY GTDGFGVGLA AGDLNGDGFD DLAVGCVNCD
WEWGGATVSI YNGSAEGLKP DSAVNAEVGD PTYAVGIGEL NGGGSLDVGS TRLGDASAVS
SRGDDGWWSD KWVNTGMPTD ENRLGSVAIG DVNGDGKDDL VIGTPTADGG SITLFPGPVT
EGKKDTVKAV ELSPTLRDLG ASLAVTDVTG DGLADVIAGA PTSTVGGTSC GAVQLLIGKT
NGIAADFSQR LTQESANIPG VCEAGDDWGR SVAAGNVDGD AGAEVVVGVP GEGIDSLGKA
GTYTTLQSTS TGLTGTGSFG VSQATANVPG TAESGDGFAS ALALRDVNDD GRMDVVIGAP
TEDVSTVKDA GQVVTALSSA TGAPAAGTTE VTGNKYGLKR LGWELA
|
|---|
| |