Gene Snas_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0474 
Symbol 
ID8881657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp494795 
End bp495223 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_003509282 
Protein GI291298004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.903154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00309714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAATG AAACCGCGAC GCTGGTCCGG TTGCGTGACA CCGGACTGAC GCTCGCTCAC 
GAAGAAGAGG ACGTCCGTGG AATGACGGTC GTCGACCGCA ACGGGGACGA GATCGGCCAC
GTCGAGGACC TGTTCATCGA CGAAACGCAG CGCAGACTGC GGTTCCTGGA GATCGGTTCG
GGCGGGTTCC TCGGCATCGG CAAGGAGAAG CGCCTGATCC CCGTCGACGC CATCACGCGC
GTGGACGAAC AGGTGCACAT CGACCAGGAG CGGAGCCACG TCGCCGCGTC GCCGGGCTAC
GACCCGGAAC TGACGCCGAT GCCGGAACCG CCCACGATCG AGGAGATCTA CGGCCACTAC
GGGTACATAC CGTTCTGGGG TCCCGGTTAC ATGTACCCGA TCTTCCCGTC CCGACGGCCC
AAACGCTAA
 
Protein sequence
MANETATLVR LRDTGLTLAH EEEDVRGMTV VDRNGDEIGH VEDLFIDETQ RRLRFLEIGS 
GGFLGIGKEK RLIPVDAITR VDEQVHIDQE RSHVAASPGY DPELTPMPEP PTIEEIYGHY
GYIPFWGPGY MYPIFPSRRP KR