Gene Snas_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0444 
Symbol 
ID8881626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp451125 
End bp452627 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509252 
Protein GI291297974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.223261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACG CCCAAGGCGA CGGCGGAGGC GGGGGCTCCG CCGTAGGTTC GGAGCTCGCG 
AAAGCCTCGA AGCAGATTCG ACGCTTGGCC ACCGGTCGAG AATTCGAGGA CGAGGGATAT
CAGTTCGCAT GGACGGACGG CGACAAGGAT GACTACGAGA ACCCGGGTTG GCTTGAATCG
GATTGGAAGC AGCTGACTCT GGATCGATAC CTCGCGGGCC CTGAATCGAA CACCAAGTAC
GGCCCGGCGA ACAAAGGCCA GAATTCGACC TATTACGTCG TAGAGGGAAG TGAGGTCTAC
TACTACAAAT ATGACAAGTT TGCCTGGGTC ACCGACCTGC TGAGCGAGTT CGGCAAAGGC
AGCCCCAGCG GGCTTCACGA CATCTGTAAG TCGGTCAAGG GCGTACCTCC GAAGCTGTGC
GCCAAAGGCG ACTGGCCCAA GGAGCTCGAC AAGTTCAAAC GCGAATACTC GCTCAAAGAA
ATAGCTGGCG AGGAGGTCCT TCTCGACTCG GGAGTCAGTG AGATGGAGCG TTGGTCGGGA
GAAGCTGCGG CCACATTCGT CCTCGCGTTC GGCGAGAACC TCACCAAATG GGAGGAAGCC
CTTTGGGGAA TGTACTTCCT GTCAGAAGCA GTGCTGGCTG GCGTCGAGGC TCAAACGGCC
ATAGTCATAG CCGCCCGCGA CGACGCACTC ACGATCGCGG AGAAGACCGC CAACGCTTTG
GTGGCTGTCA ATCACTGGTC GAAAGACGAC CTACTTGTGG CGCTTGGCGT CGCGGCGGCC
ATCATCCCCG CGGCCCTGTC GTTCGGCGGA TTCGCACTCA CCGCCACCAT CATCGGCGCG
GGAATCGGGC TCAGCAACAC CATGGTGTCG AATTCAGATT CGACGGGTGT GAGTGTCCCC
GAAAGCGAGA AGAAGCACAC CAAGCGGACA ATGAACGGCG ACAGTCCCGC CGACATATTG
GACAGGTTCA GGACCGAGAT CGGAACCATC AGGGAAGAGG CGTCCACACA GGAGGAGGAA
CTGGCGAACA AGTTGGAGAG GGTCTATAAC TCGTCCCTCG ACATACGGAC GGAAAAACTC
GAGATCACCT ATCCCGACGG CAGCAAGTCC CCAGCCGACA GTGGTCTCGG CAAACGCGAG
ACGAAGGCTC ACACATCGTA CTTGAAGGAC GCCGCGGTCA CATCGTTCCC GCAGGCGGCG
AGTTATGTTC TCGGGGCCAG GGACGAGGTG GCCCGCACCG CCGGTCTCGA TTCCGACACC
ACGTTCCATA GTGAACATCG CGACAGTGTC TCCCCTGCCG CCGAACCCTG GCGACTGGTG
CGTGATCTCC TGCAGGACAT CACCGCGGCC AACGGAAAAA AGGTTGAAGA CGCCGGAGAG
GTCATCTTCA AGGCCGCAGT GGATATGGAA CTCGTGGACG GCGAAGAAGC CGCCAACATC
GAGAAGACCT ATGACGACCT GGGGACAGGC GAAAGCGGCA GAAAGCACAA GGCCATCCCA
TGA
 
Protein sequence
MNDAQGDGGG GGSAVGSELA KASKQIRRLA TGREFEDEGY QFAWTDGDKD DYENPGWLES 
DWKQLTLDRY LAGPESNTKY GPANKGQNST YYVVEGSEVY YYKYDKFAWV TDLLSEFGKG
SPSGLHDICK SVKGVPPKLC AKGDWPKELD KFKREYSLKE IAGEEVLLDS GVSEMERWSG
EAAATFVLAF GENLTKWEEA LWGMYFLSEA VLAGVEAQTA IVIAARDDAL TIAEKTANAL
VAVNHWSKDD LLVALGVAAA IIPAALSFGG FALTATIIGA GIGLSNTMVS NSDSTGVSVP
ESEKKHTKRT MNGDSPADIL DRFRTEIGTI REEASTQEEE LANKLERVYN SSLDIRTEKL
EITYPDGSKS PADSGLGKRE TKAHTSYLKD AAVTSFPQAA SYVLGARDEV ARTAGLDSDT
TFHSEHRDSV SPAAEPWRLV RDLLQDITAA NGKKVEDAGE VIFKAAVDME LVDGEEAANI
EKTYDDLGTG ESGRKHKAIP