Gene Snas_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0318 
Symbol 
ID8881497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp329669 
End bp329941 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003509129 
Protein GI291297851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.718241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCGC CGGGCATCGG TCGGCTGATT CGGCTGGCGC GGCAGCGGCG GGGCTTGAGT 
CAGTATCAGG TGGCCGATGC CCTGGCCAGC TGCTCGGGTA ACCACTGCGT CGACCGCAAT
CGGGTCGCCC GGTGGGAGCG GGGCGGTCGG GTACCTGATC CCTATTGGAG GCACTGGCTC
GGGTTGGTGC TGGAGCTGCC CCGGGGGCGG CTGGACCAGG CCGCCCGGAT CAGTTACGCC
CAGCGGGACT ACTACGGCCG TATCAGACGA TGA
 
Protein sequence
MAPPGIGRLI RLARQRRGLS QYQVADALAS CSGNHCVDRN RVARWERGGR VPDPYWRHWL 
GLVLELPRGR LDQAARISYA QRDYYGRIRR