Gene Snas_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0177 
Symbol 
ID8881355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp178952 
End bp180112 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID 
Producthistidine kinase dimerization and phosphoacceptor region 
Protein accessionYP_003508990 
Protein GI291297712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG ACGCCGAGGC CGAGCCCGCT GACACCTCGA CGGGGGGTCG GTGGGATCCG 
GCTGGGCTTG TTCTCACCGT GCTGCCCGCG CTGGCTGCTT TTGCCGGGGG GCTGGCGCAG
TTGTATTGGG TGCTGCTGGC CGGGCCCGTG GGGACGATGC GTTGGGTCGA TATCGGGTGT
GGGGCGGCGG CGTGTTTCGT GTTGCTGTTT CGGAGTCGCG CCAGGACCGG GATCGCGATC
GCGTTGGCCG TTGTCGCCGC GTTCGCCGCT ACCGGGGGTG TGGCGAATAT GGTGGCGCTT
TACGGGGTGG CCCGGTATCG GCGGTTGCCG GTGGCGTTGG CCGTGGGGGC CGCGGATGTG
TTGGCCGGGT ATTGCTTTTG GCTTGTTTAT CCGGAGAACA ACAAGTTGTC GCTGACGTTG
GTCGTGAATG TCGCGATTGT GGCCGCGATC GTGGCTTGGG GGGCGATGCG GCAGACGCAG
GAGTCGTTGT TGTTGTCGTA TCGCGAGCGG GCCGAGCGCG CGGAACGGGA GCAGCGGTTG
CGGGAGACTC AGATTCGGCA GGCGGAGCGG ACCCGGATCG CTCGGGAGAT GCATGATGTT
GTTACGCACC GGATTTCGCT GGTCGCACTG CATGCCGGGG GGTTGATGGT CGATCCGGAG
CCGAAGATCG ATGTTGTTCG CGGTTCGGCC GAGTTGATCT ATGGTTCCGC GCGGCAGGCG
TTGGAGGAGT TGAGGTTGGC GCTTGGGGCT TTGCGGGCGG ACGAGCCGAC TTCGCTTGAG
CAGCCCGGGT TGGATCGGAT TCAGGATCTG GTCGAGGACG CGCTGCGGGC CGGGCAGGAG
GTGGAGTTGG ACATGGATCC GGCTATCGTC GAGACGGCGC CACCGGGTAT TGGCCGCGAC
GCCTATCGTT TCGTCCAGGA AGGACTCGCC AATGTCCGTA AGCACGCACC GAACGCTGTC
GCCGTGGTGA CGGTGGCCGC CGCCGATGGG GTGTTGCGGG TGCGGGTGGT CAACGAGATG
GTGGACGGGT CGTTGGGGGT GCCGGGGGCC GGGGCGGGGT TGATCGGGTT GCGGGAACGT
GCTGATCTGG CTGGCGGGAC GTTGAGCCAC GGGCCGGTTG ACGGGCGTTT CGAGCTGGTG
GGGGAACTGC CGTGGACGTG A
 
Protein sequence
MERDAEAEPA DTSTGGRWDP AGLVLTVLPA LAAFAGGLAQ LYWVLLAGPV GTMRWVDIGC 
GAAACFVLLF RSRARTGIAI ALAVVAAFAA TGGVANMVAL YGVARYRRLP VALAVGAADV
LAGYCFWLVY PENNKLSLTL VVNVAIVAAI VAWGAMRQTQ ESLLLSYRER AERAEREQRL
RETQIRQAER TRIAREMHDV VTHRISLVAL HAGGLMVDPE PKIDVVRGSA ELIYGSARQA
LEELRLALGA LRADEPTSLE QPGLDRIQDL VEDALRAGQE VELDMDPAIV ETAPPGIGRD
AYRFVQEGLA NVRKHAPNAV AVVTVAAADG VLRVRVVNEM VDGSLGVPGA GAGLIGLRER
ADLAGGTLSH GPVDGRFELV GELPWT