Gene Snas_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0160 
Symbol 
ID8881337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp163624 
End bp164205 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003508973 
Protein GI291297695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA CCAAGGAGTT CGACCCCGAC ACGGCGCTGC GCTCCGCCAT GGAGCTGTTC 
CTGCGGCATG GCTACGAGGC CACGTCGGTG GCCGATCTGG TGGAGACCCT CGGTGTCAGC
CGGGCCAGCC TGTACGCGAC CTTCGGACAC AAGGACGAGC TGTACCGCAA GGCACTGGAC
CTGTACAACC GCAGCCAGCC GATCGACTTC GCCGAGATCC TGTCGCGGCC CGGGCCGGTG
TTGCCGTCGG TGCGGGAGGT CGTGGAGGAG TTCGCGGCCC AGGCCAAGCT GCCCGACGGC
AGCGGGGCCT GCCTGATCGT CAACGCGGCC GTCGAGCGGA TGTCCGCCGA CGACGCGGTG
GCCCGGCAGG TCGAATCGTC CTGGGACTTC CTGGAGACGA CGCTGTTCAT GGCGTTGTGC
CGGGCCAAGG CCCAGGGCGA GTTGTCGCCC GACGCCGACC CACGGGCCCA GGCCCGGTTC
GTGCTGGTGA TGTTGCAGGG CATACGGGTG CTGTCCGGTT CCGCGGTCAG TGCCGAACGG
ATCGACGACG CCGCGCGGCA GACCCTGGCC GCGTTGTCGT AA
 
Protein sequence
MARTKEFDPD TALRSAMELF LRHGYEATSV ADLVETLGVS RASLYATFGH KDELYRKALD 
LYNRSQPIDF AEILSRPGPV LPSVREVVEE FAAQAKLPDG SGACLIVNAA VERMSADDAV
ARQVESSWDF LETTLFMALC RAKAQGELSP DADPRAQARF VLVMLQGIRV LSGSAVSAER
IDDAARQTLA ALS