Gene Snas_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0141 
Symbol 
ID8881318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp144794 
End bp145267 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_003508954 
Protein GI291297676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.443238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.210218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATTC CCGAAGTCGG TATCGGCACC GATGTGCACG CCTACGACGC CAGCCGTCCC 
TGTTTCGTCG CCGGTCTGGA ATGGCCCGAC ACGCCCGGGC TCGCCGGTCA TTCCGACGGG
GATGTGGCGT GTCATGCCGC GTGCAACGCG CTGTTCTCCG CCACCGGTCT CGGTGACCTG
GGAAGCAACT TCGGGGTCGA CCGCCCCGAG TGGTCGGGTG CCAGTGGGCC GACGCTGTTG
CGGGAGGCCG CCGCGCGGGT GCGGGCCGAG GGTTACTCGA TCGGCAACGT GTCGATTCAG
CTGGTCGGCA AGTACCCGAG GCTGGGTGCC CGGCGTGTCG AGGCCGAAGC GGTGCTCACC
GAATGCCTCG GTGCCCCGGT GCGGATCTCG GCGGCCACCA CCGACGGCCT CGGCTTCACC
GGACGTGGCG AAGGGCTCGC CGGGACAGCC GTCGCTTTGG TATATCGCGG TTAA
 
Protein sequence
MIIPEVGIGT DVHAYDASRP CFVAGLEWPD TPGLAGHSDG DVACHAACNA LFSATGLGDL 
GSNFGVDRPE WSGASGPTLL REAAARVRAE GYSIGNVSIQ LVGKYPRLGA RRVEAEAVLT
ECLGAPVRIS AATTDGLGFT GRGEGLAGTA VALVYRG