Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0141 |
Symbol | |
ID | 8881318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 144794 |
End bp | 145267 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_003508954 |
Protein GI | 291297676 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.443238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.210218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATTC CCGAAGTCGG TATCGGCACC GATGTGCACG CCTACGACGC CAGCCGTCCC TGTTTCGTCG CCGGTCTGGA ATGGCCCGAC ACGCCCGGGC TCGCCGGTCA TTCCGACGGG GATGTGGCGT GTCATGCCGC GTGCAACGCG CTGTTCTCCG CCACCGGTCT CGGTGACCTG GGAAGCAACT TCGGGGTCGA CCGCCCCGAG TGGTCGGGTG CCAGTGGGCC GACGCTGTTG CGGGAGGCCG CCGCGCGGGT GCGGGCCGAG GGTTACTCGA TCGGCAACGT GTCGATTCAG CTGGTCGGCA AGTACCCGAG GCTGGGTGCC CGGCGTGTCG AGGCCGAAGC GGTGCTCACC GAATGCCTCG GTGCCCCGGT GCGGATCTCG GCGGCCACCA CCGACGGCCT CGGCTTCACC GGACGTGGCG AAGGGCTCGC CGGGACAGCC GTCGCTTTGG TATATCGCGG TTAA
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Protein sequence | MIIPEVGIGT DVHAYDASRP CFVAGLEWPD TPGLAGHSDG DVACHAACNA LFSATGLGDL GSNFGVDRPE WSGASGPTLL REAAARVRAE GYSIGNVSIQ LVGKYPRLGA RRVEAEAVLT ECLGAPVRIS AATTDGLGFT GRGEGLAGTA VALVYRG
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