Gene Snas_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0106 
Symbol 
ID8881283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp115042 
End bp116061 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508920 
Protein GI291297642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.987909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.514642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA ACGACTCCGA GTTCCCGTCC GACGAGGAGC TCAAGAAGCT GGCCGGAAAG 
ATCAAGGGTG CCGCCATCAG GGCGAACACC AAGATCCTGA AGTCCTACGA CCCCGACACC
TACGGCAACT ACCTGGACCA GCTCGACGGG ATCAGGAGTC AGGCCGAGTG GCTGGGAACC
GCGTTCGACG ACTTCCTGAA GCCGTCGCCG TGGGACTTCG ACGACATGCT CAAAGCCCTG
GACGAGATCG CCTCCGACCT GGGCCAGGCG GTCGGCGAGA CCGAGATCAA AAACGGGATC
GTCCAGGGCC GCATCGACAC CACCAAGCAG TTTTTGGGCG AGGGCGGCTG GAAGGGCGCG
CTGGCCGACT CGTTCAAGAT GGACTACCTG GAGCCGATCG GTTCGCACAT CGCCGCCAAC
CAGGGCGCGG TCACGCTGGT GACGCACGAC GGTCTCCAGG CGATGCGCGA CATCTACGGC
AAGGCCCGCG AGAACCTGAA GGACCTGGGC GAGAAGGCCG TCACCGCCTT CGAACAGGCC
GACGGCATCA GCGCCAGCGA CCTGAAGACG CTGCTGACGG TGCTCAGCGC CGCCTTCGGC
CTAGGCACCG CCGTGCTGTC CGCGTTCGCG CCCGCCGCGG CGGCGGGAGC GGGCATCGCC
AGCGCGCTGG TCTCGGGCGG TATCGCCGTC GGCTCCGACA AGGTCGGCGA GGACGAGGAG
AGCGAGCTGG CCGCCGACTA CCCCGACAAG GTGGAGGAGA ACTTCAAGAA CGCGCTGGAG
AAGCTCAAGG AGCAGATCAC CACCATGGAG GACGAGCTGA TCAAGGTGCT GCAGAAGGGA
ACCTCGGACA TCGCCTCGAT CGTGTGGGGC GAGAAACTCG ACCGCCTGAA CGGGTTCTCG
GCGTTGTTCG GCATGGGGAA CCAGTCGCTG CTGGCCCCGA AGGTCCCGGA TCTGTCCATG
GTGGCCTTCG GCGACGACCC GGGCAAGCTC AAGGACGGGC TGGTCCAGGT GAGCGGCTGA
 
Protein sequence
MGRNDSEFPS DEELKKLAGK IKGAAIRANT KILKSYDPDT YGNYLDQLDG IRSQAEWLGT 
AFDDFLKPSP WDFDDMLKAL DEIASDLGQA VGETEIKNGI VQGRIDTTKQ FLGEGGWKGA
LADSFKMDYL EPIGSHIAAN QGAVTLVTHD GLQAMRDIYG KARENLKDLG EKAVTAFEQA
DGISASDLKT LLTVLSAAFG LGTAVLSAFA PAAAAGAGIA SALVSGGIAV GSDKVGEDEE
SELAADYPDK VEENFKNALE KLKEQITTME DELIKVLQKG TSDIASIVWG EKLDRLNGFS
ALFGMGNQSL LAPKVPDLSM VAFGDDPGKL KDGLVQVSG