Gene Snas_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0100 
Symbol 
ID8881277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp107995 
End bp109650 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content70% 
IMG OID 
Producturocanate hydratase 
Protein accessionYP_003508914 
Protein GI291297636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.431481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CGAGAGAAGT TCGTGCCCCG CGCGGCACCG AGTTGACCTG CGCGAACTGG 
CAGATTGAGG CCCCGTACCG GATGTTGCAG AACAATCTGG ACCCCGACGT GGCCGAGCGT
CCCGACGACC TGGTCGTGTA CGGCGGCACC GGTAAGGCCG CCCGGGACTG GCAGAGCTTC
GACGCGCTGC TGCGCACCAT GCGCACGCTC AGGGGCGACG AGACGATGCT GGTGCAGAGC
GGCAGGCCGG TCGGGGTCTT CCAAACCCAC GAGTGGGCGC CGCGGGTGCT GATCGCGAAC
TCGAACCTCG TCGGCGACTG GGCGACCTGG CCGGAGTTTC GCAAGCTGGA GCAGCTCGGT
CTGACGATGT ACGGCCAGAT GACGGCCGGG TCGTGGATCT ACATCGGAAC GCAGGGCATC
CTGCAGGGCA CCTACGAGAC CTTCGCGGCG GTGGCCAACA AGCACTTCGG CGGCACCCTG
GCCGGAACCC TGACCCTGAC CGCCGGGTGC GGCGGCATGG GCGGCGCGCA GCCGCTGGCC
GTCACCATGA ACGACGGCGT GTGCCTGATC ATCGACGTGG ACGCCACCCG GCTGCGGCGC
CGGGTCGAGA CCCGGTACCT GGACGTGGTC GCCGCCGACC TGGACGAGGC GGTGCGGCTG
GCCACCGAGG CGAAACAGGA AAAGAAGCCG CTGTCGGTGG GCCTGGTGGG CAACGCCGCG
CTGCTGGTGC CGCAGATCCT GCGCATGGGG GTGCCGGTCG ACATCGTCAC CGACCAGACC
TCCGCCCACG ACCCGCTCGC ATATGTGCCC GACGGCATCG ACCTGGGCGA CGCCCCCGAC
TACGCGGCCA AGAAGCCGGA GGAGTTCACC GACCGGGCGC GGGCCGCGAT GGCCAAGCAC
GTGCAGGCCA TGGTGGAGTT CCAGGACGGC GGCGCGGTCG TGTTCGACTA CGGCAACTCG
ATCCGCGGTG AGGCGAAACT GGGCGGCTAC GACCGCGCCT TCGACTTCCC CGGTTTCGTG
CCCGCCTACA TCCGGCCGCT GTTCTGCGAG GGCAAGGGCC CGTTCCGGTG GGCGGCGCTG
TCGGGCGACC CGAAGGACAT CGCCGCCACC GACCAGGCGA TCCTGGAGTT GTTCCCGGAG
AACGAATCGC TGGCCCGCTG GATCCGGCTG GCCGGGGAGC GGGTGGCGTT CCAGGGCCTG
CCGTCGCGGA TCTGCTGGCT GGGCTACGGC GAGCGGGACA AGGCCGGGGA GCGGTTCAAC
GAGCTGGTCG CCGACGGCAC CATCTCGGCG CCGATCGCGA TCGGCCGCGA CCACCTGGAC
ACCGGCAGCG TCGCGTCCCC GTACCGCGAA ACCGAGTCCA TGAAGGACGG ATCGGACGCG
ATCGCGGACT GGCCACTGCT CAACGCGATG CTCAACACCT CCTCCGGCGC CACCTGGGTC
TCGATCCACC ACGGCGGCGG GGTCGGCATG GGCCGCTCCA TCCACTCCGG ACAGGTGACG
GTGGCCGACG GCACCCCGCT GGCGGCCGAG AAGATCGCCC GGGTCCTGAC CAACGACCCC
GGCTCCGGGG TGATGCGGCA CGTGGACGCC GGATACGAAC GCGCCGAACA GGTCGCGCAC
GAGCGAGGCG TCCGCGTCCC GATGAGGGAG TCATGA
 
Protein sequence
MSEAREVRAP RGTELTCANW QIEAPYRMLQ NNLDPDVAER PDDLVVYGGT GKAARDWQSF 
DALLRTMRTL RGDETMLVQS GRPVGVFQTH EWAPRVLIAN SNLVGDWATW PEFRKLEQLG
LTMYGQMTAG SWIYIGTQGI LQGTYETFAA VANKHFGGTL AGTLTLTAGC GGMGGAQPLA
VTMNDGVCLI IDVDATRLRR RVETRYLDVV AADLDEAVRL ATEAKQEKKP LSVGLVGNAA
LLVPQILRMG VPVDIVTDQT SAHDPLAYVP DGIDLGDAPD YAAKKPEEFT DRARAAMAKH
VQAMVEFQDG GAVVFDYGNS IRGEAKLGGY DRAFDFPGFV PAYIRPLFCE GKGPFRWAAL
SGDPKDIAAT DQAILELFPE NESLARWIRL AGERVAFQGL PSRICWLGYG ERDKAGERFN
ELVADGTISA PIAIGRDHLD TGSVASPYRE TESMKDGSDA IADWPLLNAM LNTSSGATWV
SIHHGGGVGM GRSIHSGQVT VADGTPLAAE KIARVLTNDP GSGVMRHVDA GYERAEQVAH
ERGVRVPMRE S