| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0065 |
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| Symbol | |
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| ID | 8881241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 71640 |
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| End bp | 74444 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003508880 |
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| Protein GI | 291297602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGATTCG AGACTCTGGG GCCGCTGCGC GTCTCCGACG AATCGGGCGT GCTCCCGCTG
CGCGGCAGGA AGGCACGGGT ACTGCTGGCG GTCCTGGTGA GCCGGGCCGG CGATGCGGTG
CCCATCGACG TGCTGGCGCG GGCGATCTGG GACGACAAGG TGCCCGACAC CGCGATCAAG
ACGCTGCGCT GGCACATCCA TCAGCTCCGG AGGCTGCTCG GGGACGCGAA CCGCATCACC
TACGACGACG GCGGATACCG GCTGCGCGCC GATCCGTCCG AAGTAGACAG CTTCGGGTTC
GAGCGGTTGT GCGCCGACGG CTTCGCGGCC CAGCGTTCCC GCGACCCCGT GATCGCGGCC
CGCTGTTTCA CCGAGGCGCT GAAACTGTGG CGCGGGCCGG CGTTCGGCGA TCTGGTCGAC
TGTGGAATCC TGCGCGACGA GGCCGCCCGC CTCGACCAGC TGTACCTGGA CGCCACCGAG
CAGCGCCACG GCGTCGAACT CGACCTCGGC AACCACGAAG AGGTGCTGGC CGAACTGACC
GAGCTGGTGG AGCGGTACCC GTTGCGCGAG AACCTGCGCG CCCACCTGAT GGTGGCGCTG
TACCGCTGCG GACGGCGGTC CGAGGCACTG GAGATGTTCC GCGCTGGACG CGAGCTGTTC
GCCGAACAGC TCGGCCTGGA TCCGGCCCCG AGACTGCGGG AGCTGGAGAA GGCCATCCTC
AACTCCGATC CGGCCCTCGA CCCGCCGTCG GCCACCCGGT CCGGTCCCGC CGAGCTGCCC
CGCGACATCG CCACCTTCAC CGGACGCGAG GCCGAGGTCT CCGAACTGAC CGAGCTGCTG
GTCACCGATT CGATGACGCC GCTGGTGATC TCGTCCATCA ACGGCGGCGG CGGAGTCGGC
AAGTCGGCAC TGGCGATCCA CCTGGGACAC CTGGTGCGCG AACGGTTCCC CGACGGACAG
CTCTACGTGA ACCTGCAGGG CGCCACCCCG AACGCGGAAC CGCTGGAACC GGCCGAAGTG
CTGCGACGGT TCCTGCGCTC ACTCGGAGTC GGCGGCGACG ACGGGATCAG CGAGGTCGCG
GAACTGGCGA ACCGGCTGCG CACCGCCACC AACGGCAAAC GGATGCTGTT CCTCTTGGAC
GATGCCCGCG ACAGCGGCCA GGTGCGTCCG CTGCTGCCCT CGGAACCGCG GTGCGCGGTG
CTGATCACCA GCAGACGAAC GCTATCCACA CTGGATGGAT CGGTGAACCG GGCCCTGGAC
GGACTGTCGG ACGCCGACGC GGTCACGCTG CTGGAACGCC TGGTGGGGAC GGACCGGGTG
GCCGCCGAAC CCGAGGCGGT GCGACGGCTG CTCGGCTGGT GCGGCGGAAT GCCGCTGGCG
CTTCGGATCT GCGCGGCCCG ACTGGTGGCG CGTCCCCGGT GGTCGGTCGC GTCGCTGGCC
GACGAACTGG CCGACGAGAC CCGTCGGCTG TCCGAACTGG AGGTCGACGA CCTGGCGATC
CGCTCCAGCT TCGCGGTGGG CTACCGGCAG CTGTGCGAGG ACTCCGCATC CGCCGCGCGG
GTGTTCCGGC TGCTGGGTCT GCACGACGGT CCGGACTTCA CCACCCGGCA CGTCGCGGCA
CTGGCCGAGC TGGACGAACC GGACGCCGAG CGATCACTGG CCGAACTGAC CGCCACGCAC
CTGGTCGAGC CCGCCGGTCC GGGTCGCTAC CGCACGCATG ACCTGATGCG GTTGTTCGCG
CGGGAGCGGG TCACCGCCGA GGAGTCGGCG GCGGAACGAC GAGCGAGCGT CGAACGGGAA
CGCCGGTTCT ATCTGGGGAC CGTACGGAAC ATGCTGGGGG TGTGCGAGCC GGGCATGCGC
AATCGCCTCG GGCTGGTGCC CGAGGAGTTC GTCCGGCACG GCGTCCGATT CGAGGACGCC
AAGTCGGCTT ACGCGTGGGC GATGGCGGAC ACGGCGAACC TGCTGGCCAT CTGCCGGGCG
GCCATCGGCG GCGGCGCCAC CGACGACCCG GACTTCACCG CGACCACGGT GACGGTTCTG
GGCCCGGTAC TGGTGATCCG CGGTTCCGCC GGGCCCATGG CCGACCTCCA TGAGCTCGGG
ATCAAGGCCA GGAAATGGGT CACCAAACCG GATCTGCGCT TCTTCATCTC CACCGGCGCC
GCCGAGCTGA TGCGGGTCGC CGGCAAGCAC GACGAGGCGC TGCGACACCT CGAGGTCGCC
ATGTCGATCT CACGCGAGCA GGGCTGGCGG GTACGGGAAG GCTGGATCCT GGTCGGTGTG
GGCACGATGT ACTGGTGGAT GGGCGAACTC GACCAGGCCA CCGACCATCT CGACCGCGCG
GTGGCCATCG CCGCCGAGAC CGGCGACCGC GCGCTGGAGG GCTCGGCCAC CTCACATCTC
GGCCATGTGC ACGCGGAGTC GGGTCGGCAC GACGCCGCCA TCGAGGCGAT GCGCAAGGTC
CTGGCGTTCG CGCAGGACTC GGGACGGCCA CGAGGCCGGG TGGAGGGCAT GATCTCGCTC
GGCCGCGTGT ACCAGCTGGC CGACCGGCCC ACCGAGGCAC GCGACTGCTA CGAGCGTGCG
ACCGCGATGC TCGACGAGAC CGGGCTGGCG GGTACCCGGT ACGAGGCCGA GGCGCTGTGG
GGGCTGGCCG ACGCCGGGCA CGCGCTCGGC GAAACCGAAC TCACCCGTGA GCGGTGGGAC
CGCGCGGCGA AGCTCCTGTT CGACCTGAAG TTGATCGACG CGGGCGAACG CGACCACATC
ATCTCCGTTC CCGAACCGGA TCGTCCGAAG GCGATACGGT ACTGA
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| Protein sequence | MRFETLGPLR VSDESGVLPL RGRKARVLLA VLVSRAGDAV PIDVLARAIW DDKVPDTAIK
TLRWHIHQLR RLLGDANRIT YDDGGYRLRA DPSEVDSFGF ERLCADGFAA QRSRDPVIAA
RCFTEALKLW RGPAFGDLVD CGILRDEAAR LDQLYLDATE QRHGVELDLG NHEEVLAELT
ELVERYPLRE NLRAHLMVAL YRCGRRSEAL EMFRAGRELF AEQLGLDPAP RLRELEKAIL
NSDPALDPPS ATRSGPAELP RDIATFTGRE AEVSELTELL VTDSMTPLVI SSINGGGGVG
KSALAIHLGH LVRERFPDGQ LYVNLQGATP NAEPLEPAEV LRRFLRSLGV GGDDGISEVA
ELANRLRTAT NGKRMLFLLD DARDSGQVRP LLPSEPRCAV LITSRRTLST LDGSVNRALD
GLSDADAVTL LERLVGTDRV AAEPEAVRRL LGWCGGMPLA LRICAARLVA RPRWSVASLA
DELADETRRL SELEVDDLAI RSSFAVGYRQ LCEDSASAAR VFRLLGLHDG PDFTTRHVAA
LAELDEPDAE RSLAELTATH LVEPAGPGRY RTHDLMRLFA RERVTAEESA AERRASVERE
RRFYLGTVRN MLGVCEPGMR NRLGLVPEEF VRHGVRFEDA KSAYAWAMAD TANLLAICRA
AIGGGATDDP DFTATTVTVL GPVLVIRGSA GPMADLHELG IKARKWVTKP DLRFFISTGA
AELMRVAGKH DEALRHLEVA MSISREQGWR VREGWILVGV GTMYWWMGEL DQATDHLDRA
VAIAAETGDR ALEGSATSHL GHVHAESGRH DAAIEAMRKV LAFAQDSGRP RGRVEGMISL
GRVYQLADRP TEARDCYERA TAMLDETGLA GTRYEAEALW GLADAGHALG ETELTRERWD
RAAKLLFDLK LIDAGERDHI ISVPEPDRPK AIRY
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