Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0064 |
Symbol | |
ID | 8881240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 68185 |
End bp | 71487 |
Gene Length | 3303 bp |
Protein Length | 1100 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003508879 |
Protein GI | 291297601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.9544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGG TGAACAAGTC CGCGCCGGGT GGTTGGCGCG CCCGCATACC CACGGTGCTG GCCACGCTGA TGGCGCTGTT GACCCTGATC GTGGCGCTGG CCGCGGTCGC CAGCGCGTTC CGCGACCGCA CCGTCAAGGT GCGCGAGTTC GTCGAGATGG TGCTGATCCC GGCGCCACCG AACCTCGCCT ATGCGGCCTT CCTGGCGATC TTCGCCGCCG CTGTCGCCCG CCGCAAACGG CTGGCCTGGT GGATCCTGGT CGGCTACTTC TCGCTCACGC TGGTGCTGCT GGCGCTGCTG AACACGATCG TGATCCTGGC ACCCGCGTTC GTGTTCGCCG ACCCCGCTTC CGTTGAGGAC ACCCCCGGTT ACGTGGTGCC CCGGCTGGTG CTGGCCACGT TCATCGCGAT CGTCTTGCTG GTGCTGCTGC TGGTGGGCCG CTCGCAGTTC CCGGCCCGGG TGGGGCGCGG CAGCCTGTGG AAGGCGATCG GGGTGCTGGC CGCGCTGATG GCGATGTTCG TGCTCATCGG CTGGGGCCTG GTGTCGATGT TCCCCGGCAC GGTCACACAC GGCGACCGGT TCCAGTACAC CTTCGACAAG GTCGTCGGTG GGGCGCTGCG GTTCGAGATG ACCCGCAGCG GCGTGGCACC CGGCTGGATC GACCTGCTGC TGGGCGCGTT CGGCGCGGTG GCGCTGCTGG CGGCGCTGTT CACGCTGTTC AAGTCGCAGC GGCTGGCCGC CGCCATGAAC GCCTGGGACG AGGTGCGGCT GCGGGTGCTG CTGGCCGCAC ACGGCGAGGA CGACTCGCTG GGCTACTTCG CGACCCGGCG CGACAAGGCG GTGATCTACG CGCCCGGCGA GACCGCGGCG GTCACCTACC GCACCGTCAC CGGCGTCTGT CTGGCCTCAG GCGACCCGAT CGGCGACCCC GCCGACTGGC CGAAGGCCAT CGATGCCTGG CTGCGGCAGG CGCGCGGCCA CGGCTGGGTG CCCGCGGTGC TGGGCGCCAG CGAGGCGGGC GCCACCGCGT ACCGGCAGGC GGGCCTGCGG GTGCGCGAGA TCGGCGACGA GGCGATCCTG CTGCCCCGCG AGTACACACT AGACGGACGC GAGATGCGCC CGGTCCGGCA GGCGGTGGCG CGCATCGAAC GGGCGGGCTA CACCGCCCGG ATCCGCCGCC ACGGCGAACT GTCCGCATCG GAGATGGCCG CGGCGATCAA ACGCGCCGAC GACTGGCGCG ACACCAAGAC CGAACGCGGC TTCTCGATGG CGCTGTCCCG GTTCGGCGAC GCCGACGACG CCGACAACGT GCTGGTCGAG GCCATCGACG GGATCGGCAA GGTGCGGGCC ATGCTGTCCT TCGTGCCCTG GGGCCGCCGG GGCCTGTCGC TGGACCTGAT GCGCCGGGAA CGCGACGCCG ACAACGGCCT GATGGAGTTC ATGGTCACCT CGCTGTGCCG CGAGGCCGGA CGCCTGGGCG TGGACCGGAT CTCGCTCAAC TTCGCCATGT TCCGCGCCGT CTTCGAGGAG GGCGCCCGCA TCGGCGCCGG ACCGATCCTG CGCTGGTGGC GGCGTCTGTT GACCTTCTTC TCCCGCTGGT GGCAACTGGA GTCGCTGTAC CGCTCCAACG TCAAATACCG TCCCCATTGG GCACCCCGCT ACCTGTGTTA CGGCGAACGC CGGGCACTGG GCCGGGTCGG GCTGGCCGCC GCGGTCGCCG AGGGCTTCCT GTCGGCCGAC ATCTCCCGGG TCTCCATCGG ACGGGCGGCC CGCGCCAAAC CGCTGCCCGG CCTGGCCGAG GCACTCGCCG AAGCAGCCAC CACCCCGACC GTCGACCCCA GAACCCGCCT GCCCGAACAG ATGCGGGTCC GGCTGGACAA ACTGGACCGA CTGCGCGACG CCGGGGTCGA ACCGTACCCG GTGGGCTTCG AACGGACCCT GGCCTGCGGC CAGGTCGCCC GCGACTTCCC GGACCTGCCG CCCGACGCCA ACACCGGACG CTTCGTCGCG GTCGCCGGAC GGGTGATGCT GCTGCGCCAC CACGGGAAAC TGTCCTTCGC GACCATAAGG GACTGGACCG GCGACCTCCA GGTCATGGTC GTCGGCGACT CTGACTTCCG CCACACCGTC GACATCGGCG ACCACCTGGG CGTCGAAGGC GAGGTCGTCA CCTCCAAACG CGGCGAACTG TCGGTGCTGT CGAAGAAGTG GACCCTGACC GCCAAGTGCC TGCACCCGTT GCCGGACAAG CACCTCGGCC TGGCCGACCC GGAGGCCAAG GTGCGGCAGC GTCACCTCGA CCTCATCGTC AGCCCCCAGG CCCGCACCGA CCTGCGAGCC CGCGGCGCCG TCATCCACTC ACTGCGGACC GGCCTGCACG ACGACGGGTA CCTGGAGGTC GAGACCCCGA TCCTGCAGGC GATCCACGGC GGGGCCAACG CCCGTCCGTT CGTCACCCAC ATCAACGCGT ACGACATGCG GCTGTACCTG CGCATCGCGC CCGAGTTGTA CCTCAAGCGA CTGTGCGTCG GCGGCGTCGA GAAGGTCTTC GAACTCGGCC GGACGTTCCG CAACGAGGGC GTCTCGTTCA AGCACAACCC CGAGTTCACG ATGCTGGAGG CGTACCAGTC CTACGCGGAC TACAACACGA TGCGCGAGCT CACGATGCGA CTGGTCCGCC AAGCCGCCGT CGCGGCCTTC GATACCACGG TCATCACCCG CGACGACCAC GAGATCGACC TGGCCGCCGA CTGGCCCGTC ATCCCGATCC ACCAAGCCAT CTCCACCGCC CTCGGCGAGC ACATCGACCC GGGCACACCC CGCGACAAGC TCCGTCAGCT GTGCGAGGCG GCCGACATCC CCCTAGATCC ACAATGGGAC GAGGGCGCCA TCGTCCTCGA GATGTACGAG CGCCTGGTAG AACACGCCAC CACCGCCCCA ACGTTCTACA GCGACTTCCC CACCTCGGTC TCCCCGCTCA CCCGCCAACA CCGCACCGAC CCGCGCCTGG CGGAACGCTG GGACCTGGTC GCGTTCGGCA CCGAGATCGG CACGGCCTAC TCCGAACTGA TCGACCCCGT CGAGCAGCGC CGCCGCCTCA CCGAACAGTC GCTACTGGCA GCGGGCGGCG ACCCGGAGGC AATGGAGCTC GACGAGGACT TCCTGGCCGC GCTCGAATAC GCGATGCCCC CCACGGGCGG CCTCGGCATC GGCGTCGACC GGCTCGTCAT GCTGCTGACC GGCAACGGCA TCCGACAAAC GCTGCCCTTC CCGCTGGTGA AACCCACAGT GGACCAGCCA TGA
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Protein sequence | MTTVNKSAPG GWRARIPTVL ATLMALLTLI VALAAVASAF RDRTVKVREF VEMVLIPAPP NLAYAAFLAI FAAAVARRKR LAWWILVGYF SLTLVLLALL NTIVILAPAF VFADPASVED TPGYVVPRLV LATFIAIVLL VLLLVGRSQF PARVGRGSLW KAIGVLAALM AMFVLIGWGL VSMFPGTVTH GDRFQYTFDK VVGGALRFEM TRSGVAPGWI DLLLGAFGAV ALLAALFTLF KSQRLAAAMN AWDEVRLRVL LAAHGEDDSL GYFATRRDKA VIYAPGETAA VTYRTVTGVC LASGDPIGDP ADWPKAIDAW LRQARGHGWV PAVLGASEAG ATAYRQAGLR VREIGDEAIL LPREYTLDGR EMRPVRQAVA RIERAGYTAR IRRHGELSAS EMAAAIKRAD DWRDTKTERG FSMALSRFGD ADDADNVLVE AIDGIGKVRA MLSFVPWGRR GLSLDLMRRE RDADNGLMEF MVTSLCREAG RLGVDRISLN FAMFRAVFEE GARIGAGPIL RWWRRLLTFF SRWWQLESLY RSNVKYRPHW APRYLCYGER RALGRVGLAA AVAEGFLSAD ISRVSIGRAA RAKPLPGLAE ALAEAATTPT VDPRTRLPEQ MRVRLDKLDR LRDAGVEPYP VGFERTLACG QVARDFPDLP PDANTGRFVA VAGRVMLLRH HGKLSFATIR DWTGDLQVMV VGDSDFRHTV DIGDHLGVEG EVVTSKRGEL SVLSKKWTLT AKCLHPLPDK HLGLADPEAK VRQRHLDLIV SPQARTDLRA RGAVIHSLRT GLHDDGYLEV ETPILQAIHG GANARPFVTH INAYDMRLYL RIAPELYLKR LCVGGVEKVF ELGRTFRNEG VSFKHNPEFT MLEAYQSYAD YNTMRELTMR LVRQAAVAAF DTTVITRDDH EIDLAADWPV IPIHQAISTA LGEHIDPGTP RDKLRQLCEA ADIPLDPQWD EGAIVLEMYE RLVEHATTAP TFYSDFPTSV SPLTRQHRTD PRLAERWDLV AFGTEIGTAY SELIDPVEQR RRLTEQSLLA AGGDPEAMEL DEDFLAALEY AMPPTGGLGI GVDRLVMLLT GNGIRQTLPF PLVKPTVDQP
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