Gene Snas_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0055 
Symbol 
ID8881231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp61544 
End bp62539 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508870 
Protein GI291297592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GCGAAGGACG CCGCACCCGC TGGCTGGCCG TGCTGCTGTT GCTGGTCCTG 
TCCCCGGTGT GCGCCGAGTA CATCCAGGCC TACGACGACT CGACCGGCAA CCCCGTGGCC
CTGCTGGGCG CGCTGCTCGT GTTCGTCCCG CTGTACGGCG CGCCCGCCGT GCTGATCCGG
GAACTGGCGC GCCGCTTCGA CGTCCGCTGG CCCGGCATCC TGGCGCTGAC GACGGGGTTC
GGCATCCTGC AGGCGGGCGT CATCGACCAG TCGATGTTCG ACACCGGCTA CCGGGGCATC
GACTACTGGG ACGACATGAT CATGCCGACC TGGATCGAAC CGCTGGGCAT CTCGGTCAAC
GCGTCGCTGG CTTTCGTTCT CGGGCACGCC ATCTGGAGCT TCGGCGTCCC GATCGCGCTG
TCGGAGGCGA TCAGCGGCCG GTACTCGCGC ACCCCGTGGC TGCGCTGGCC AGGCTTGAGC
GTGTTGGTCG TGCTGTACCT GGCGGCGGCC GCGCTGATCA TGGTCGGCGA GGACAGTGGC
GGCGCCTCGT CCGGTCAGTT GGTCGGGGCG CTGGCCGTCA CCGCCGCGCT GGCGCTGTTC
GCGTTCACGC TGGGCCGTCG TCGGCGGGAC CGGCGCGATC GCAGGGTGCC CGCCCCGCTG
CTGGTCTTCG CGGTCGCGGC GCCGGTGTCG TTCGGGTTCA ACATGCTCGG CTACTCGATC
TCGGACACCG TGATCGTGGT CGGCCTTCTG GTCGCGGTGG CGGCGGCCGT GACCTACCTG
TCGGGCTCCC GCGCCTGGAC CGGCCGCCAC GTCGCGGCGC TGGCCAGCGG CACGCTGCTC
GGCCGGGTCG GCATCGGTTT CCTGACCGAC CCGCTCGGCG ATGTCTCGGC GGTGGCCCAC
GCCGGGCACA GTGTCTTCTT CCTGCTGATG GCGCTGGGCC TGTGGCTGTT GGCTGACCGC
CGCAGCCGAG CCACGCCCGC GACTGACGTG GCGTGA
 
Protein sequence
MNRREGRRTR WLAVLLLLVL SPVCAEYIQA YDDSTGNPVA LLGALLVFVP LYGAPAVLIR 
ELARRFDVRW PGILALTTGF GILQAGVIDQ SMFDTGYRGI DYWDDMIMPT WIEPLGISVN
ASLAFVLGHA IWSFGVPIAL SEAISGRYSR TPWLRWPGLS VLVVLYLAAA ALIMVGEDSG
GASSGQLVGA LAVTAALALF AFTLGRRRRD RRDRRVPAPL LVFAVAAPVS FGFNMLGYSI
SDTVIVVGLL VAVAAAVTYL SGSRAWTGRH VAALASGTLL GRVGIGFLTD PLGDVSAVAH
AGHSVFFLLM ALGLWLLADR RSRATPATDV A