Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0023 |
Symbol | |
ID | 8881197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 28682 |
End bp | 29839 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | PKD repeat-containing protein |
Protein accession | YP_003508838 |
Protein GI | 291297560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.347453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGAG TCGCCACCGT GGCGGCCCTG GGACTGCTGG CCGCGGCGGT GCCGTTGCTG TTGGGGCCCG GCGCGGGCGC GGAGCAACAG GACAAGGCTC CCAGTCCGTC CCGGGACGTC AACACCGTCG AGATCGCCGA GATCGAATCC GCCGACGTCG ATATGTCCTA TCTGGCCGGA CGACGGAAGG TGCTGTCCTA CCCGGGGGCG CGTTTCGTCA AGCTGCACTT CTCCCGGCTG GAGCTGGCGC CGAACGACTA CATCACGATC TCCGATCCAT ACGGCGGACA GGAAACCCGT TACACCGGCC AGCCCGGAGC ACTGTGGACG ACGTCGGTGA CCGGCGACTC CGCGGTCGTG CGGCTGCACT CCGAGGAGGG GCCGCTGTCG GACGCGATGA CGAAGTTCGG CGCCGAGATC GACAAGGTCT CCAAGGGCCT GTCGCCCGAC GAGGTCCGTA AGCGCGAGCG CGCCGAACGC CGCCCCGAGA GCGTGTGCGG CGACGACGAC CAGCGCGACG CGGTCTGTTA CGAGTCGACC GAGCCCGAGG TGTACGCCAA CGCGGCACCG GTGGCGCGGC TGCTCATCGA CGGTTCCACC ATGTGCACGG CCTGGCGGGT CGGTTCCAAG AACCGGCTGT TGACCAACAA CCACTGTTTC GAGACCTCCG AGCAGGCCCG CGACACCGAG GTGTGGTTCA ACTACGCGTG CAGCGGCTGC GGCGGCCAGG CACTCAAGAA GGCGGTGAAG GTGCGCGGCG AGTCCGTCAT CGAGACCAAC GCCGAGTACG ACTACACCCT GTTCACCGTG GACGACTTCG ACGCGATCCG GCGGTTCGGC CAGCTCGAAC TCGCCGACCG GGCGCCCCGC GAGGGCGAGA AGCTCTACAT CCCGCAGCAC CCCGGCGGCG AACCCGCGAA GGTGGCGTTG GAGTCCGACG CCGACTCCGG GGCCTGCGTC GTGGACAAGC CGAGCTTCGA CGGCTACGTC GACGGCAGCG ACGTCTCGTA CTACTGCGAC ACCGAGTTCG GGTCCTCCGG CTCGCCGGTG TTGTCACGCG AGACCCACGA GGTGATCGGG CTGCACCACT TCGGTGGCTG CCCGAACTCG GGCGTGCGGT CCGACAAGAT CCACGACCGC GTCAAGGGCG ACATCTGA
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Protein sequence | MRRVATVAAL GLLAAAVPLL LGPGAGAEQQ DKAPSPSRDV NTVEIAEIES ADVDMSYLAG RRKVLSYPGA RFVKLHFSRL ELAPNDYITI SDPYGGQETR YTGQPGALWT TSVTGDSAVV RLHSEEGPLS DAMTKFGAEI DKVSKGLSPD EVRKRERAER RPESVCGDDD QRDAVCYEST EPEVYANAAP VARLLIDGST MCTAWRVGSK NRLLTNNHCF ETSEQARDTE VWFNYACSGC GGQALKKAVK VRGESVIETN AEYDYTLFTV DDFDAIRRFG QLELADRAPR EGEKLYIPQH PGGEPAKVAL ESDADSGACV VDKPSFDGYV DGSDVSYYCD TEFGSSGSPV LSRETHEVIG LHHFGGCPNS GVRSDKIHDR VKGDI
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