Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0011 |
Symbol | |
ID | 8881185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 12924 |
End bp | 14750 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003508827 |
Protein GI | 291297549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGTC GACTCGGCGA CCTCGCCGAC CCATTCCTGC CCGACCCGCC CCACAACCCG CCCACCCGCG TCTGGCCGTT CCTGAAACTC CAGCTGCGCC CGCTGCGGCA CATCATCACC GCCTCACTGC TGTTCTCGGC CGCCAGCGCG GCCGTCGAGG TGTGGCTGAT CTTCTACACC GGACAACTCG TCGACACCCT CGCCGCGACC ACCCCGGCCC GGCTGTGGGC CGAACACGGT CTCGAACTGG TACTCGTCGC CGCACTGTTC CTGATCCTGC GTCCCCTGCT GTGGACCGGT CGCGAAAGCC TGGACGACAT CGCCTTCCGC CCCAACGCCG CCACCGGAAC CCGCTGGCGC CTGCACCGCC ACGTCCTCGG CCAGTCGGTC GGCTGGTTCC GCAAGGACCT CGCCGGACGC ATCGCCTCAC GAGTCACCGA ACTCACCACC GCCGCAACCG GCGCCGCCTA CACGGTGCTG CACACCCTGT CCTTCGTCGG CATGTACATC GTCGGCTCGT TCTGGCTCAT GTCCGCACAG GACATCCGAC TCGCGATCCC GCTGGCGCTG TGGATCGGGC TCTACTTCGC CGTGATGGCC TATGTGGTGC CCCGCTACCG CCGGGCCTCC CAACGCCACC AGTCCACCCA GTCGGCCCTG ACCGGTCTGC TGGTCGACAC TTACGCCAAC ATCGACACCA TCAAGATGTC GGCGACCGGA ACCGACGACC CCGAAAGCCG CCGCCGCTTC GCCGACAACC ACACCGCTCA CCTACGGCTG CAACGCGTCG AGGTCACGAT CAACGCGAGC ATGATGGCGC TGGGAACCAT CCTCACCGTC GGCCTCGTCG GCTACTCGAT CGCACTGTGG CAGACCGGGG CCGCCCCGCT GGGACTCGTC GCCGCCTCCC TGGCACTGAG CCTGCGCGTC AACGGCATCG CCGAGTGGCT GCTCGACGCG GTCACCGCCC TGTTCGGCTG CCTCGGCGCG ATGCGCGAAC ACCTCCCCAC CATCGCCCAA CCCCTGGAGA TAACCGACGC CCCCACCGCC ACCGACCTGA CGATCACCGG CGGAGCCATC CGCCTCCACG ACGTCAGTCA CCACTACGGC AAGGAAACCG GCGGCCTGGA CCGCGTCTGC CTCAACATCC CCGCCGGCCA GAAGATCGGC CTCGTCGGCC GCTCCGGGGC CGGTAAGTCA ACCCTGGTCA ACCTGATCCT CCGGTTCTTC GACGCCGAAT CCGGAACCAT CACGATCGAC GACCAGAACA TCCGCGCCGT CACCCAGGAC AGCCTGCGCC ACCACATCGC CCTGGTGAGC CAGGACGCCT CCCTGCTCCA CCGCTCGGTG GCCGCCAACA TCACCGGCGG CGTCGACAAC ATCGACCGAA CCCGAATAAC CGAGGCGGCC CGCAAAGCGG CGGCCGACGG CTTCATCCCC ACCCTGCGCG ACGCCACCGG CCGCACCGGC TACGACGCCC ACGTCGGCGA ACGCGGCGTC ACCCTCTCGG GCGGCCAACG CCAACGCATC GCCCTGGCCC GGGCCTTCCT CACCGAAGCC CCGATCCTGG TCCTCGACGA GGCCACCTCA GCGCTCGACT CCGAATCCGA AGCGGCCATC CAGGAAACCC TCTCGGAGAT CATGGCGGAC AAGACGGTCA TCGCGATCGC CCACCGCCTG TCCACCATCG CCCACCTTGA CCGCATCGTC GTCCTCGACG AGGGCCGCAT AGTCGAAGAC GGCAGCCACG ACCAACTACT GACCACTGGC GGCATCTACG CCGACTTGTG GAAACACCAA TCCGGAGGCT TCCTCAGTTC CACGTGA
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Protein sequence | MFRRLGDLAD PFLPDPPHNP PTRVWPFLKL QLRPLRHIIT ASLLFSAASA AVEVWLIFYT GQLVDTLAAT TPARLWAEHG LELVLVAALF LILRPLLWTG RESLDDIAFR PNAATGTRWR LHRHVLGQSV GWFRKDLAGR IASRVTELTT AATGAAYTVL HTLSFVGMYI VGSFWLMSAQ DIRLAIPLAL WIGLYFAVMA YVVPRYRRAS QRHQSTQSAL TGLLVDTYAN IDTIKMSATG TDDPESRRRF ADNHTAHLRL QRVEVTINAS MMALGTILTV GLVGYSIALW QTGAAPLGLV AASLALSLRV NGIAEWLLDA VTALFGCLGA MREHLPTIAQ PLEITDAPTA TDLTITGGAI RLHDVSHHYG KETGGLDRVC LNIPAGQKIG LVGRSGAGKS TLVNLILRFF DAESGTITID DQNIRAVTQD SLRHHIALVS QDASLLHRSV AANITGGVDN IDRTRITEAA RKAAADGFIP TLRDATGRTG YDAHVGERGV TLSGGQRQRI ALARAFLTEA PILVLDEATS ALDSESEAAI QETLSEIMAD KTVIAIAHRL STIAHLDRIV VLDEGRIVED GSHDQLLTTG GIYADLWKHQ SGGFLSST
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