Gene Smon_0227 details

Gene Information

• Locus tag: Smon_0227
• ID: 8599925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: +
• Start bp: 268000
• End bp: 274278
• Gene Length: 6279 bp
• Protein Length: 2092 aa
• Translation table: 11
• GC content: 30%
• Product: YadA domain protein
• Protein accession: YP_003305590
• Protein GI: 269123013

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAATA TTAAGATACA AAAGGTTGAA AAGTTTTTAA AAAGTTCTTT AAAGAATAAG 
ATAAGTGTAA ATGATAAGAC AGTTATAAAA TACATTATGC TTGGATTTAT AGGACTATCA 
GCAATGTCTT ATGGTTCTTG GTTATCAATA AATGATAATA CTGGAGCAGC TGGATCAGAT 
GGTGGTGGAA GTAACACGAC TCATGGTTCG GATAATCAAA AAAATAATAC AATATTAGCA 
TTATATGATA ATTCGTATAA TACTTCAAGT TCAGTAATAA TAGGAGCAGG TGGAAAAACT 
TATGGTAAGG GTTCAGAAAA TGTAGTAATA GGATTTAATG CAAAATCTGA AAAACAACAA 
AATGTGGTAA TAGGTGCTAA TACTAAATCG GATTTACAAA ATTCTGTAAT TCTTGGAAAT 
AAGTCTTATG TTTATAAAGA TCATTTTGGT ATAACAAACT ATATACAAGA TAGTGATGGT 
CAAGGAGTTG CTGTAGGTAA CTCTGTATTT TCAACTGCAC AAGCAACATC TATAGGGAAT 
AATACATATG CTATAGGAAG ATCATCTATA GCTATAGGTA ATGATGATAT ATCAGCATAT 
GAAAATAAAG TTACTCAACA TGATTATGAT AGTTATTTCA AAAAACTTTA TGAAAAGATA 
GATAAAGATG GAACTCTATA TGGTTACGGA AGTAATAATA AAACAGATGC AAGTAAACAT 
AAATGGTCGC CAACACTAGC ACAAGGACAT GGATCAATAG CCATAGGTTC TCGTTCTATA 
GCCTATGCTG ATGGTTCAAC AGCACTAGGG ACACTTGCTT ATGCACTTAA AAAAGGATCT 
ACAGCAGTTG GAACATTAAC AAGAGCAGAA GGAGAAGGAG CTATAGCATT AGGAAGAGAA 
ACTAATGTAT TTTCAGATAA TGCTATAGCA TCAGGTAATA AGACATTAGT TCTAAAAGAA 
GGTGGAGCTG CTTATGGATT ATCAGCTATT TCAGGTGGTG AAAATTCAAT AGCAATAGGA 
ACAGATGTTT ATTCTAATGT TGATTATGAT TATGATAATA GTAATATAGT ATTAGGTGGA 
AATCAAAAAA AAATAGAAAC AGGTTTATTT GGAAATATAA ATAAATATGA TGATCAAGGT 
TCAAGTAATG ATGAAACAAA AAGAGGTTTA TATGGATTTG ATTTAAATGG AGTTGCTAAA 
ACTATAATAG GTCTTGGACA AGATAATCCA CCTGGTAATG TAAGTGGAGC TAAAAAAGGA 
GATTATTTAA ACAGTGGAAC ATACTTTAGT CAATACAAAA GCTATATAGA TGGATTAGAA 
AGTGGATTAA GTAATGCAAT AACTAAAGAC AATAAACAAT CAACAAATTC AATTACTATA 
AAAAAAGAAG AAAAAAATGG AGTAAAGGAT GTAGCTAAAA GCAAAGGTAA AAATGCAATA 
GTTATAGGGA GTAAATCAGG AGCATTTGGG GATAATGGGA TAGCCTTAGG AAGAGGGTCA 
TTTTCACTTG AAAATAACTC TATTGCAATA GGTTCATATT CTTATGCAAA ATCAAAGAAT 
GCTATTGCAC TTGGTATAGT CTCAAGAGCT TTAGGTGAAG GTTCTATTGC TTTTGGTAAT 
GGTGCTGGAG TAGATATAGA AGGTAAGAAC TCTATGGTCT ATGGTCATGG TTCAGTAGCA 
TATGCTCCTA ATTCAATAAT ACTTGGAATA AATTCTCGTG TTTGGGGAGA TAAGAATAAA 
GGAGATTCCA TTATAATAGG TAATGATGCT AGTATAGATG AATTAAAAGA AAATGGAACT 
GTAAAAAAAG GTCATAATGG AAAATCAGTA TTAGCATTAG GAAATAAAAC TAATGCAACA 
CTTGATAACT CAGTAGCACT TGGATATCTT TCAGCAACAG ATTATACACA AGAGGATTTA 
AATAAAGCAG GATATACTGC AAAAGGATCA TACTCTATAC CAACATCAGC AAAGGTTGGA 
GTAATATCAG TAGGTAAAAA AGGTAATGAA AGAAGAATAA TTAATGTTGC TTCAGGATAT 
AGGGATTCTG ATGCAGTTAA TGTTGCCCAA CTTAGGACAC TTGAAGATAG AATAGATGGG 
GCAACAGAAG AAGTAGATGA TAAGATTAGA TATTTCTCTG TAAATACAGA AAATGATTTA 
ACGACTTTAG TTAAGAAGAA AATAGACTAT AAGAACTATG TTAAATTAAA AACACAAATG 
TTAACAATAG AAGCCAGAAA AGAAAATGGT GAAACAATAA ATGATACAAA CATTAGGGAA 
TTAAAAAGTA AGTTAGATAA ATTAGAAAAA GATAGTGGTA TAACAGATAA AGCTACTGAA 
ATTAAAGCAT TAGGAGAAAT TAAAGACGCG AAATATCAAA CTGGTAATAA GTTTGACTTT 
GATAAATACA TAAGTGCATT AGAGAAGGCA AAACAAGAGG ATTCAACTAA TGAAAGAATT 
GAAAGTGTAT TAACAGATGA TGAAAAGACC AAATTAACAT CAAATAATTT CTCTAATGAG 
GGAGCAAAAG GTAAAAATTC TATAGCTATA GGATATATGG CAAAAACAGA AGATGCTGCA 
GAAAATGCTA TAGCAATAGG ACATGGTGCA AAAGCAACAG TTAAGGATAG TATAGTATTA 
GGAAGTGGTT CTAAAAATAT AGCAGATATA ACAAAATCAG GGTATGATAT TACTACAAAA 
ACAAGTTCTA CTTCAATGGA TTCAACATGG AAACCAACTA ATGGAGAATT TGCTATAGGA 
GATGGAACTA ATAAAACTAG AAGAATAACA GGAGTAGCTG CAGGGGATAA AGACACTGAT 
GTTGTAAATG TGGCTCAACT TAAAAAAGCA ACTTCAGGAT TATTAAATGA TAAATTTTTA 
AAGTTTGTTG GAAATGATGG TAAAGAGGCT AAAATTAAAT TAGGAGAAAC ACTTAATATT 
AAAGGTGAAG GTAATGTAAC TAAAACAGCA GGAGATAATA TAAGGGTAAG TAAGGCAGAT 
GATAGTACAT TAACTATAGG GTTATCAGAA GAATTGAAGA ATATAAGCAC GATAACAACT 
AAAACTAATG CAAATAACGA ACAAACAACA TTATCTCAAA CAGGTCTTAA AGTTACTGGA 
AATAATGATA AACAAATATC AGTTACATCT GAAAATATAG AAGTAAAAAA TAGTACAGAT 
AAGACAACAT TAACAGCAGG TGAATTAAAA ATCACAGATA AAGATGGAAA TGATGATAAA 
CAAACAAATA AGCTGACTAA AACTTCTATA ACTTTAACAG ATAAGAATAA CAATAAAGAA 
GATACAAATA AAATAACAGC AGATAAAAGT GAAATAACTA ATAAAGCTGG AGATAAAACA 
ACTATTACAG CTGATGAAAT ATCAGTATCA AATGGAAATG ATAAAGTAGA AATTACTAAA 
AAATCCATAA CTGGAGTAAC TACTATTGGA AAAAATGATA ATAATAGGCT AGTATTTAAT 
AATGGTAATT CAGGAACTGC AATGTTAAAA GTTGATGGTA AAGAACTAAC ATTTACTAAA 
TCAGGAGAAC ATATAAAGAT ATCAAATGTT GCAAATGGAA TATCTGATAA TGATGCTGTA 
AATGTATCAC AACTTAAAAA GTATGTAGAT GCCTTAGGTG GAAATGCTAA AATAGATGAT 
AAAGGTAATG TTACAGGACC TACATATAAA TTAAAAGTAG GAGCTACAAC AAATGGAACA 
AATGATGCTA CAAAAGATTA TAATACTGTA GGAGATGCTT TAAAAGCTTT AGATGATGCT 
ATAGGTAACT CATCAAAAAA TATAACAGAT CTTACTAACA AACAAATATC ATTCCAAGGT 
AATGGTGGAG ATACAGATAA AGTAAGTAAA AAGCTAGGAG AAACTTTAAA AATACAAGGT 
GAAGGAAATG TTAGTGGAAA TACAGCCAAA GATAATATTA AAGTTGAGAA AAATAAAGAT 
AGTGATGGCT TAGACATTAA ACTAGCTGAA GATTTAAAGA ATTTAAATAG TATAGAAACT 
AAAGAAGCAG GTGGAAAGAA AACAAAAATC ACAACAGATG GTGTTGAGGT TACAAGTGAT 
AAAGGTAAAG CTAACCTAAC AGCAGATAAG CTAACATTTG GACCAAAAGA TGATAAATCA 
ACTGATAAAA CAAGTACATC AATAGGAAAA GATGGAATAA CATTAAAAAG CAAAGATGGA 
AAAGATTCAG TATCAATAAA ACCAAGCAAT GATACTGATG GTGGAATAAT AGAAGTTAAA 
TCTAAAGATG GAAATTCAAG TATTAAAATA GATGGAGAAA AAGGTTCTAT TACTGGACTT 
AAAGACATAT CACCTAATGA AACAGATGGA AGTATAGCAG TTAACAAAAA TTATGTAGAT 
AACCAAATAA AGGCAATAGC TAATGGACCA TTTGAGTATG AAACATCAAA TGGAGAAAAA 
GTAGTAAGAG GACAAGATAA TAAACTGTAT AAAGAGGAAG ACTTAAACAA ACATTACTAT 
GATGAAAAAG AGCAAAAATA TAAACCTAAA AACAATGGAA ATGGGCAACA GAATGGACCA 
ACTCCATTAG AAAACAAAGA TGTAACAGTA AATGTAATGC CTAAGAATGG AACACCAATA 
TCAATAGGAA ATGTGGCAAG TATTCTAGGA GAAGAAGCAA CTACAACATC AGATAAAGCT 
GCTGAAAAAG TTAAAGAACT AATTGATAAT ACAAATAAAT TATATGAAAA TAATAAAAAC 
AAAGTAGCAA CAGGAACAGA CATATTAGCC TTAGCCAAAG CAGGAATAAG CTTTGAAGGA 
AATACAGGTT CAGGAGATAA AATTCATAGA AACCTAGGAG AACAAGTAAC TATTAAAGGT 
GAAGGAACAG ATGGTAAGAA TAACTTTACT AGTGCAAGTG GAAACATACA AGTTAAATCA 
GATAAAGATA AAGGAGAATT AACAGTAAAA CTATCAGATA AGCTAACTAA CATGACTTCA 
TTTGAAACAA AAGAATTAGA TGATAAGATT AAATCTAAAG TTAAACTAGA TAAAGAAGGA 
CTAACTACAA TTAATAAGAC AGATGATAAT AAATACATAA TGTCTAAAAC AGGACCAAAA 
GGAACTGAAA TAGGTAAATA TGATGTTAAT CCATTAATGA ATGGTAATAA TAAAGCTCAA 
CCAACTACAA GTGCCAAATA TACATTAGAA GGAACAACAA TAAAAGATGA TAAAGGAAGT 
TCTAACCTAA CATCAAATAC ATTAACTTTA AAAGATAAAG ATGATAAACA AAGAATAACA 
TTAGATAATA AAGGTGATAC TCCAACTATT TCTTTATCAA ATAAAGAAGG AGAAGAAACA 
GTTAAAATAG ATGGAGGAGA TGGAAAAGAT AAAGAACCAA CAATATCATT TAAAGTAGAT 
AAAGATAAAG GATTAGGAGT AGTAAAAGGT TTAAGAGATC TAACAGATAA TGATCCAGGA 
CATTATGCAG TAAATAAGAG ATATGTGGAT AATAAATTAA ATGTAGCCTT AGGAGGGGTA 
GCAAATGCAA TAGCAGTAGC AAGTATACCA CAGATAAATG GAAAGGGACA TAATATAGGA 
GCATCATATG GATATTATGA AGGACATTCA GCCTTTGCAT TAGGGTTAAG TGGAATAAAT 
GAAAGAGGAA ATGTATTATA TAAGGCAAAC TTATCATTAA ATACAAGAGG AAATGTAGGT 
ATAGGAGCAG GGATAGGATA TCAGTTTGGA GGAGATAGAG TTAATACAAG TAAAGATAAT 
ATAATAATAG ATAATTCATT AGGTGAATTA GATGGAATAA ATAAGAAGTT AGAAGAACAG 
AATAATAAAC TAATTGCACA AAATAATAAG TTAAATGAGA AAAGAGGAGA TTTAAGTAAG 
GAATTAAAAG AACTTAAAGA TAAGATAAGT GTAATAGAAA AAATTAAGAT GAATGAAGAT 
GACTTATACA CACTAGATGG ATATAGATTA GGTATACATG AGCTAACAAA GAGCCAAGAA 
GAGATGTTAA TGAATATAGT AAGAGAGTTA AATGAGAACT ATAAGAATAG GAAGATATAT 
ATAACAGGAT ATACAGATAA TGTATCAGGA GAGGATTTAA ATCTTGAGTT AGGTTTAAAG 
AGAGCAAATG TAGTAGCAAA GAAACTAAGA GAGTTAGGCT TAGATATGAG TATATCAATA 
AGGAAGGTAA GTTCATCAGG ATATAATAAC ATAGTGGAAA CAAACAAGAG TTCAAATGGA 
AGGTCTTCTA ATAGAAGGGT AGAAATTGAA TTAAGATAG 

 

Protein sequence

MRNIKIQKVE KFLKSSLKNK ISVNDKTVIK YIMLGFIGLS AMSYGSWLSI NDNTGAAGSD 
GGGSNTTHGS DNQKNNTILA LYDNSYNTSS SVIIGAGGKT YGKGSENVVI GFNAKSEKQQ 
NVVIGANTKS DLQNSVILGN KSYVYKDHFG ITNYIQDSDG QGVAVGNSVF STAQATSIGN 
NTYAIGRSSI AIGNDDISAY ENKVTQHDYD SYFKKLYEKI DKDGTLYGYG SNNKTDASKH 
KWSPTLAQGH GSIAIGSRSI AYADGSTALG TLAYALKKGS TAVGTLTRAE GEGAIALGRE 
TNVFSDNAIA SGNKTLVLKE GGAAYGLSAI SGGENSIAIG TDVYSNVDYD YDNSNIVLGG 
NQKKIETGLF GNINKYDDQG SSNDETKRGL YGFDLNGVAK TIIGLGQDNP PGNVSGAKKG 
DYLNSGTYFS QYKSYIDGLE SGLSNAITKD NKQSTNSITI KKEEKNGVKD VAKSKGKNAI 
VIGSKSGAFG DNGIALGRGS FSLENNSIAI GSYSYAKSKN AIALGIVSRA LGEGSIAFGN 
GAGVDIEGKN SMVYGHGSVA YAPNSIILGI NSRVWGDKNK GDSIIIGNDA SIDELKENGT 
VKKGHNGKSV LALGNKTNAT LDNSVALGYL SATDYTQEDL NKAGYTAKGS YSIPTSAKVG 
VISVGKKGNE RRIINVASGY RDSDAVNVAQ LRTLEDRIDG ATEEVDDKIR YFSVNTENDL 
TTLVKKKIDY KNYVKLKTQM LTIEARKENG ETINDTNIRE LKSKLDKLEK DSGITDKATE 
IKALGEIKDA KYQTGNKFDF DKYISALEKA KQEDSTNERI ESVLTDDEKT KLTSNNFSNE 
GAKGKNSIAI GYMAKTEDAA ENAIAIGHGA KATVKDSIVL GSGSKNIADI TKSGYDITTK 
TSSTSMDSTW KPTNGEFAIG DGTNKTRRIT GVAAGDKDTD VVNVAQLKKA TSGLLNDKFL 
KFVGNDGKEA KIKLGETLNI KGEGNVTKTA GDNIRVSKAD DSTLTIGLSE ELKNISTITT 
KTNANNEQTT LSQTGLKVTG NNDKQISVTS ENIEVKNSTD KTTLTAGELK ITDKDGNDDK 
QTNKLTKTSI TLTDKNNNKE DTNKITADKS EITNKAGDKT TITADEISVS NGNDKVEITK 
KSITGVTTIG KNDNNRLVFN NGNSGTAMLK VDGKELTFTK SGEHIKISNV ANGISDNDAV 
NVSQLKKYVD ALGGNAKIDD KGNVTGPTYK LKVGATTNGT NDATKDYNTV GDALKALDDA 
IGNSSKNITD LTNKQISFQG NGGDTDKVSK KLGETLKIQG EGNVSGNTAK DNIKVEKNKD 
SDGLDIKLAE DLKNLNSIET KEAGGKKTKI TTDGVEVTSD KGKANLTADK LTFGPKDDKS 
TDKTSTSIGK DGITLKSKDG KDSVSIKPSN DTDGGIIEVK SKDGNSSIKI DGEKGSITGL 
KDISPNETDG SIAVNKNYVD NQIKAIANGP FEYETSNGEK VVRGQDNKLY KEEDLNKHYY 
DEKEQKYKPK NNGNGQQNGP TPLENKDVTV NVMPKNGTPI SIGNVASILG EEATTTSDKA 
AEKVKELIDN TNKLYENNKN KVATGTDILA LAKAGISFEG NTGSGDKIHR NLGEQVTIKG 
EGTDGKNNFT SASGNIQVKS DKDKGELTVK LSDKLTNMTS FETKELDDKI KSKVKLDKEG 
LTTINKTDDN KYIMSKTGPK GTEIGKYDVN PLMNGNNKAQ PTTSAKYTLE GTTIKDDKGS 
SNLTSNTLTL KDKDDKQRIT LDNKGDTPTI SLSNKEGEET VKIDGGDGKD KEPTISFKVD 
KDKGLGVVKG LRDLTDNDPG HYAVNKRYVD NKLNVALGGV ANAIAVASIP QINGKGHNIG 
ASYGYYEGHS AFALGLSGIN ERGNVLYKAN LSLNTRGNVG IGAGIGYQFG GDRVNTSKDN 
IIIDNSLGEL DGINKKLEEQ NNKLIAQNNK LNEKRGDLSK ELKELKDKIS VIEKIKMNED 
DLYTLDGYRL GIHELTKSQE EMLMNIVREL NENYKNRKIY ITGYTDNVSG EDLNLELGLK 
RANVVAKKLR ELGLDMSISI RKVSSSGYNN IVETNKSSNG RSSNRRVEIE LR