Gene Smon_0173 details

Gene Information

• Locus tag: Smon_0173
• ID: 8599871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: +
• Start bp: 192154
• End bp: 198390
• Gene Length: 6237 bp
• Protein Length: 2078 aa
• Translation table: 11
• GC content: 30%
• Product: YadA domain protein
• Protein accession: YP_003305537
• Protein GI: 269122960

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GTAAAATACA TGAGATAAAG AAAATTTTAA AGTACAGTTT AAAAAATAAG 
GTGAGCATAA CTGATAAGAC AATAATAACT TACTTTATAC TTGGATTTGG TGGGTTATAC 
ACATTATCTT ATGGATCTTG GTTAGCCATA AATGATACGA ATGGAACGGT AGGTAAATAT 
AATAGTTCTA AAGATGATGG AGAGAATAAT ACTAAGAATA ATATAGTATT GACATATTAT 
AATAGTCAAG ATAATGTTTC CCATTCAGTA ATAATAGGGG CTGGTAAAAA AACTTATGGT 
AAAGGATTAG AAAATGTAGT AATAGGATTT AATGCTCAAT CAGAAAAACC GCAAAATGTA 
GTAATAGGAG CTAATACTAA ATCAGATTTA CAAAATTCTG TAATTCTTGG TAATAATTCT 
TATGTTTATA GAGATAAATT TGGTGTTACA AGTAGTATGT CAACAGATGA TGGACAAGGA 
GTTTCTATAG GGAATGCAGT TTATTCAACA GGGCAAGCAA CATCTATAGG GAATAATACT 
TATGCTATAG GGAGATCATC TATTGCTATA GGAAATGATG ATATATCTGC ATATACTCAA 
TCTGTTAGTA AATATGATTT CAACACTTAT TTTAAGACAC TTTATAATTC AATAGATGGT 
TTTGGAAAAA CATATGGTTA TGGTAGTAAT GGAGGAACTG ATTCAACTAA ACATAAATAT 
TCACCAACAC TTGCACAAGG ACATGGATCA ATAGCCATAG GTTCTCGTTC TATAGCTTAC 
TCTGATGGGT CAACAGCATT AGGGACACTT GCTTATGCAT TAAAGAAAGG TTCAACGGCA 
GTTGGTACTC TAACAAGAGC AGAAGGAGAA GGGGCAATAG CATTAGGAAG AGAAACTAAT 
GTATTTGCTA ATAATGCGAT TGCCTCAGGG AATAAGACAT TGGTTTTATC AGAAGGTGGA 
GCTGCTTATG GTTTGTCAGC TATTTCAGGT GGACAAAACT CTGTAGCTAT AGGGACAGAA 
GTTTATTCTA ATGTTGAATA TGATTATGAG GATAAAATAA AATTAGATGG AACTGATGGC 
AAAACTATAG AAACAAGTCT ATTTGGTGAT ATAACTAAAT ATGGAGAAGT AGGAGCACAT 
GAAACAAAAA GAGGTTTATA TGGTTTTGAT TTAAATGGTG TTGCTAAAAC AATTATAGGG 
CTTGGGCAAG ATGAGCCATT AGGAAAAGTT TGGGGAGCTT CAAAAGGAGA ATATCTAAAG 
AGTGGAGATT ATTTCTCAAA TTACAAAAGC TATATAGAAG GTATAGAAAA TGGATTAACT 
AAAGCTAAAG ATTCTACAAA TAAAAATAAT ACAAATGCAA TAACTATAAA AAAGGCAGAA 
AAAAATGGAG TAAAAGATAT AGCTAAAGGT AAGGGTAAAA ATGCTATAGT TATAGGAAGT 
ATGTCAGGAG CATTTGGAGA TAATGGTATA GCTTTAGGTA GAGGTTCATT TTCACTATCA 
GATAATTCTA TTTCAATAGG GTCATATTCA TATACAAAAG ATAAAAACTC TATAGCACTT 
GGGATAGCTT CAAGAGCATT AGCAGAGGGT TCTGTTACAT TTGGTAATGG AGCTGGAGTA 
GATGTAAATG GTAAAAACTC TATGGTTTAT GGTCATGGTT CAGTTGCATA TGCTCCTAAT 
TCAATAATAC TAGGAATAAA CTCACATATT TGGGGAAGTA AGGATCAAGG AGATTCTATT 
ATCATAGGTA ATAATGCTAA TGTGAGTAGT AAAAAAGATG ATAATAGCAA AAACAATTTA 
GTTGGACATA ATGGAAAATC AGTACTTGCT TTAGGAAATA AGACTAATGC AACACTAGAT 
AACTCAGTAG CATTAGGATA TTTTTCAGCA ACAGATTATA CACAAGAGGA TTTAAATAAG 
GCTGGATATA CAGCTAGAGG TTCATATTCT ATACCGAGTT CGACTAAAGT TGGAGTAATA 
TCAGTAGGTA AGAAGGGACA TGAAAGAAGA ATAGTAAATG TTGCATCAGG ATATAGAGAT 
TCTGATGCTG TTAATGTTGC CCAACTAAAA ACACTAGAAG ATAGATTAGA TGGAGCAACA 
GAAGAAGTAG ATGATAAAGT TAGATATTTC TCTGTAAACA CAGAAAATGA CTTATCTAGT 
TTAATTAAGA AAAAAATAGA CTATAAGAAC TATGTTAAAT TAAAAACACA AATGCTAACT 
ATAGAGGCTA GAAAAAAAGA TGGAGAAACA ATAAGTGATT CTAACATTAG TGGATTGAAA 
ACTAAATTAG AAGAATTAGA AAAGAATGAT GAAGTAAAGA ACCATGCAAC TGAAATTAAG 
GCTTTAGGGA GTTTAGATGA TAGTAAGTAT AAGACTAATA ATAAGTTTGA TATAAATAAA 
TATATTGATG CCTTAGAAAA AGCTAAAACA AAAGATTCAA CTAGTGAGAA AATAGAAAAG 
ATATTAACAG ATGAAGAAAA AACTAAATTA ATGTCAAATA ATTTTGCTAA TGAGGGAGCA 
AAAGGTAAGA ACTCTATAGC TATAGGATAT AGTGCAAGTA CAGAAAAAGA TAAAGCTGAA 
AATGCGATAG CTATAGGTAA TGGAGCAAAA GCAACTGCTA AAGATAGTAT AGTTTTAGGA 
AGTAATTCTG AAAATACAGC AGATGTAACA AAGTCTGGAT ATGATATTAC TAATTCAAAT 
TCTAATTCAG GTGCAGCTTG GAAACCAACT CATGGAGAAT TTGCTATAGG TAAAGATTCA 
ACAATTACTA GAAGAATAAC AGGAGTAGCA GCAGGAGAAA AAGATACAGA CGCTGTAAAT 
GTGGCTCAAC TTAAACAACT TGCCTCAGGA TTACTAAAAG ATAAAGAACT AATATTTGTA 
GGTAATACTG GTGGAGATGT AAAAGTTAAA ATAGGTGAAA CACTTAATAT TAAAGGTGAA 
GGAACAGTTG CTAATGGAAC AGCTGCAAAC AATTTAAAAG TAACAGCAGA TGAAAAGACT 
AAAACTTTAA CTATAGGACT TGCAGAGAAT TTAGTAGGAA TAAATACTAT AACAACTAAG 
AAGAGTGCAA ACAATGAACA AACAGTATTA TCTCAAACTG GTCTTAAAGT TACAGGAAAA 
GATAGTAAAG AAACATTAGT TACATCTGAA AATGTAGAAG TAAAAAATGG TACAGATAAG 
ACAACATTAT CAGCAAGTGG ATTAAAAATC ACAGATAAAG ATGGAAAAGA TGACAAACAA 
ACAAATGAAC TTACTAAAAC TTCTATAACA TTAAAAGATA AAACTGGTGG CAAAGAATCT 
ACTAATACTA TAACAGTATC TTCAAGTGAG ATAAAAGATA AAGAGGGTAA TAGTGTTAAA 
ATAACAGCAG ATAAAATAAT TGTATCAAAT GGAACTGAAA AAGTAGAAAT AACTAAAAAT 
TCCTTAATGG GAGCAACAAC TGTTGGAAAA GATGCTGATA ATAGCCTAAT ATTTGGAAGT 
GGAACAACAG ATAATACTAC TACAAAATTA AAGGTCGGTG GAAAAGAATT AACATTTACT 
AGAACAGGAG ATAACATAAA GATATCTAAT GTTGCAAATG GAGAAAATGA TAATGATGCT 
GTAAATGTAT CTCAATTTAA AAAGTACGCT GAATTTTTAG GTGGGGGAGC TAAGTTTGAT 
AATGGAACAT TTACAGGACC AACATATATG TTAAAAGCAG GAGGTACTAC AGTAACTAAT 
CATAAAGATG TTGGTTCAGC TTTAAGTGCA TTAGATAAAG CTATAGAAAA TTCATCTAAA 
AATATAACAG AACTTACTAA TAAGCAGATA TCATTCCAAG GAAACGATGA TAGTCCTATA 
AGTAAAAAAT TAGGAGAAAT TTTAAAGATA AAAGGTGAGG GAACAGTTAA TGGAGCTACG 
GCTAAAGATA ACATTAAAGT TACAAAGAAT GATTCTAATG ATGGATTAAA TATTAAACTA 
GCTGAAGATT TAAAGAATTT AAATAGTATA GAAACTAAAG AAGTAGGTGG AAAGAAAACA 
AAAATCACAA CAGATGGTGT TGAGGTTACA AGTAATGATA ATAAAGCTAA TCTAACAGCA 
AATAAGTTAA CATTTGGGGC AAAAGATAAT AATACCGATA AAACAGAGAC AACTATTGAA 
AAATCAGGGA TAACTGTAAA AAATAAAGAA GGAAAAGATT CAGTAACAAT AAAATCTGGA 
GATAATGGTG GAACAATAGA AGTTAAATCT AAAGATGGAA ACTCAAGTGT TAAAATAGAT 
GGAGAAAAGA AATCTATTAC AGGACTTGCA GATATAAAAC CAGATGAAAC AGATGGAAGT 
ATAGCAGTTA ACAAAAATTA TGTAGATAAT CAAATAAGAG CAATAGCTAA TGGACCATTT 
GAGTATGAAA CATCAGATGG TGAAAAAGTT GTAAGAGGAC AAGATAATAA ATTGTATAAG 
GAATCTGAAT TAAAGGATTA CTACTATGAT GAAGCTACAT CTAAATACAA ACATAAAACT 
AATGGTATGA ATAATCAAGA ACCAAAAGCA TTAGAAAATA AAGATGTAAC AGTAAATGTA 
ATGCCTAAGA ATGGAACACC AATATCAATA GGAAATGTAG CAAGTATTCT AGGAGAAGAA 
GCAACTAAAA CATCAGATAA AGCTGCTGAA AAAGTTAAAG AACTAATTGG AAATTCTGAT 
AATAGCAAAA ACAAAGTAGC AACAGGAACA GATGTATTAG CATTAGCTAT GGCTGGAATA 
AATTTTTCAG GTAATGAAGG TTCAGGAGAA AAAATCCATA GAAACATAGG AGAACAAGTA 
ACTATTAAAG GTGAAGGAAC AGATAGTAAA GATGACTTTA CTAGTGCAAG TGGAAACATA 
CAAGTTAAAT CAGATAAAGA TAAAGGAGAA TTAACAGTAA AACTATCAGA TAAGCTAACT 
AACATGACTT CATTTGAAAC AAAAGAATTA GATGATAATG GAAATAAATC TAAAGTTAAA 
CTAGATAAAG AAGGACTAAC TACAATTAAT AAGACAGATG ATAATAAATA CATAATGTCT 
AAAACAGGAC CAAATGGAAC TGAAATAGGT AAATATGATA ATGATCCATT AATGAATAAC 
AATACTTCAC CAACAAATAG TGCAAAATAT ACATTAGAAG GAACAACAAT AAAAGATGAT 
AAAGGAAGTT CTAACCTAAC ATCAAATACA TTAACTTTAA AAGATAAAGA TGATAAACAA 
AGAATAACAT TAGATAATAA AGGTGATACT CCAACTATTT CTTTATCAAA TAAAGAAGGA 
GAAGAAACAG TTAAAATAGA TGGAGGAAAT GGAAAAGATA AAGAATCATC AATATCATTT 
AAGGTAGATA ATGATAAAGG ATTAGGAGTA GTAAAAGGTT TAAGAGATCT AACAGATAAT 
GATCCAGGAC ATTATGCAGT AAATAAGAGA TATGTAGATA ATAAATTAAA TGGAGCTTTA 
GGAGGGGTAG CAAATGCAAT AGCAGTAGCA AGTATACCAC AGATAAATGG AAAGGGACAT 
AATATAGGAG CATCATATGG ATATTATGAA GGACATTCAG CCTTTGCATT AGGGTTAAGT 
GGAATAAATG AAAGAGGAAA TGTATTATAT AAGGCAAACT TATCATTAAA TACAAGAGGA 
AATGTAGGTA TAGGAGCAGG GATAGGATAT CAGTTTGGAG GAGATGATGT AAGAAGAGAA 
GAAGTAATAA TAGAAAATAA TCCTTCAAAT GATATAAGAG ATAGATTGAT TGAACAAAAT 
GAAAAGTTAA TTAATCAGAA TAAGAAGTTA GAAGAAGATA ATGATAGATT AAGAAGAGAA 
AATGATAGGA TAGGAGATGA GATAAAAGAG TTAAGAGAAA GAATAAAAGC AATAGAAAAA 
ATTAAGATGA ATGAAGATGA CTTATACACA CTAGATGGAT ATAGATTAGG TATACATGAG 
TTAACAAAGA GCCAAGAAGA GATGTTAATG AATATAGTAA GAGAGTTAAA TGAGAACTAT 
AAGAATAGGA AGATATATAT AACAGGATAT ACAGATAATG TATCGGGAGA GAATTTAAAT 
CTTGAGTTAG GTTTAAAGAG AGCAAATGTA GTAGCAAAGA AACTAAGAGA GTTAGGCTTA 
GATATGAGTA TATCAATAAG GAAGGTAAGT TCATCAGGAT ATAATAACAT AGTAGAAACA 
AATAAGAGTT CAAATGGAAG GTCTTCTAAT AGAAGGGTGG AGATTGAATT AAGGTAA 

 

Protein sequence

MKKSKIHEIK KILKYSLKNK VSITDKTIIT YFILGFGGLY TLSYGSWLAI NDTNGTVGKY 
NSSKDDGENN TKNNIVLTYY NSQDNVSHSV IIGAGKKTYG KGLENVVIGF NAQSEKPQNV 
VIGANTKSDL QNSVILGNNS YVYRDKFGVT SSMSTDDGQG VSIGNAVYST GQATSIGNNT 
YAIGRSSIAI GNDDISAYTQ SVSKYDFNTY FKTLYNSIDG FGKTYGYGSN GGTDSTKHKY 
SPTLAQGHGS IAIGSRSIAY SDGSTALGTL AYALKKGSTA VGTLTRAEGE GAIALGRETN 
VFANNAIASG NKTLVLSEGG AAYGLSAISG GQNSVAIGTE VYSNVEYDYE DKIKLDGTDG 
KTIETSLFGD ITKYGEVGAH ETKRGLYGFD LNGVAKTIIG LGQDEPLGKV WGASKGEYLK 
SGDYFSNYKS YIEGIENGLT KAKDSTNKNN TNAITIKKAE KNGVKDIAKG KGKNAIVIGS 
MSGAFGDNGI ALGRGSFSLS DNSISIGSYS YTKDKNSIAL GIASRALAEG SVTFGNGAGV 
DVNGKNSMVY GHGSVAYAPN SIILGINSHI WGSKDQGDSI IIGNNANVSS KKDDNSKNNL 
VGHNGKSVLA LGNKTNATLD NSVALGYFSA TDYTQEDLNK AGYTARGSYS IPSSTKVGVI 
SVGKKGHERR IVNVASGYRD SDAVNVAQLK TLEDRLDGAT EEVDDKVRYF SVNTENDLSS 
LIKKKIDYKN YVKLKTQMLT IEARKKDGET ISDSNISGLK TKLEELEKND EVKNHATEIK 
ALGSLDDSKY KTNNKFDINK YIDALEKAKT KDSTSEKIEK ILTDEEKTKL MSNNFANEGA 
KGKNSIAIGY SASTEKDKAE NAIAIGNGAK ATAKDSIVLG SNSENTADVT KSGYDITNSN 
SNSGAAWKPT HGEFAIGKDS TITRRITGVA AGEKDTDAVN VAQLKQLASG LLKDKELIFV 
GNTGGDVKVK IGETLNIKGE GTVANGTAAN NLKVTADEKT KTLTIGLAEN LVGINTITTK 
KSANNEQTVL SQTGLKVTGK DSKETLVTSE NVEVKNGTDK TTLSASGLKI TDKDGKDDKQ 
TNELTKTSIT LKDKTGGKES TNTITVSSSE IKDKEGNSVK ITADKIIVSN GTEKVEITKN 
SLMGATTVGK DADNSLIFGS GTTDNTTTKL KVGGKELTFT RTGDNIKISN VANGENDNDA 
VNVSQFKKYA EFLGGGAKFD NGTFTGPTYM LKAGGTTVTN HKDVGSALSA LDKAIENSSK 
NITELTNKQI SFQGNDDSPI SKKLGEILKI KGEGTVNGAT AKDNIKVTKN DSNDGLNIKL 
AEDLKNLNSI ETKEVGGKKT KITTDGVEVT SNDNKANLTA NKLTFGAKDN NTDKTETTIE 
KSGITVKNKE GKDSVTIKSG DNGGTIEVKS KDGNSSVKID GEKKSITGLA DIKPDETDGS 
IAVNKNYVDN QIRAIANGPF EYETSDGEKV VRGQDNKLYK ESELKDYYYD EATSKYKHKT 
NGMNNQEPKA LENKDVTVNV MPKNGTPISI GNVASILGEE ATKTSDKAAE KVKELIGNSD 
NSKNKVATGT DVLALAMAGI NFSGNEGSGE KIHRNIGEQV TIKGEGTDSK DDFTSASGNI 
QVKSDKDKGE LTVKLSDKLT NMTSFETKEL DDNGNKSKVK LDKEGLTTIN KTDDNKYIMS 
KTGPNGTEIG KYDNDPLMNN NTSPTNSAKY TLEGTTIKDD KGSSNLTSNT LTLKDKDDKQ 
RITLDNKGDT PTISLSNKEG EETVKIDGGN GKDKESSISF KVDNDKGLGV VKGLRDLTDN 
DPGHYAVNKR YVDNKLNGAL GGVANAIAVA SIPQINGKGH NIGASYGYYE GHSAFALGLS 
GINERGNVLY KANLSLNTRG NVGIGAGIGY QFGGDDVRRE EVIIENNPSN DIRDRLIEQN 
EKLINQNKKL EEDNDRLRRE NDRIGDEIKE LRERIKAIEK IKMNEDDLYT LDGYRLGIHE 
LTKSQEEMLM NIVRELNENY KNRKIYITGY TDNVSGENLN LELGLKRANV VAKKLRELGL 
DMSISIRKVS SSGYNNIVET NKSSNGRSSN RRVEIELR