| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6519 |
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| Symbol | |
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| ID | 5320822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | - |
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| Start bp | 208309 |
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| End bp | 209808 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640778068 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001315000 |
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| Protein GI | 150378406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.126482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTTG TGGAGACGAT TGCGAAGATA CGCCGCCTTG CGCTTGTGCA GGGCAAGTCG
ATCAAGGCGA TCTGCCGTGA ACTCGGCATA TCGCGGAAAG TGGTGCGGAA GGTTCTGCGC
ACCGATGAGA CGGAGTTCAA ATACGAGCGG ACCCGCCAGC CACAGCCGAA GCTCGGCCCG
TGGCGGGATA AGCTCGATCA ACTGCTGCTG AACAATGAAG CCAAAGCTTC ACGCGAGCGA
CTGACGCTGA TCCGGATATT CGAGGATTTG CGCGATCTGG GCTACGAGGG CGGTTACGAT
ACCGTCCGAC GCTATGCCCG GACGTGGGCG AAGGAGCGCG GGGCCGTGAC GGCGCAAGCC
TATGTGCCGC TCTATTACGC GCCGGGCGAG GCCTACCAGT TTGACTGGAG CCACGAGATT
ATCGTGCTGA ACGGCGTGAC GACGACGGTG AAGGTAGCCC ATGTCCGGCT CTGCCACAGC
CGGATGATGT ATGTGCGGGC CTACCCGCGC GAGACGCAGG AGATGGTGTT CGACGCCCAT
GACCGGGCGT TCGCCTTCTT CGGCGGGGCC TGCACGCGCG GCATCTACGA CAACATGAAG
ACCGCGGTGG AGACGGTCTT TGTCGGCAAG GAGCGGCAAT ATAATCGCCG CTTTCTGCAG
ATGTGCAGCC ATTACCTGAT CGAGCCAGTG GCCTGCACGC CGGCGTCAGG ATGGGAGAAA
GGACAGGTCG AGAACCAGGT CAATCTGGTG CGGGAACGCT TCTTCACGCC GCGACTGCGC
TTCAAATCCT ACGATGAGCT GAATGGCTGG CTGCTGGACA AGTGCATCAG CTACGCCCGC
GCCCATAAGC ATGTCGATCA GCCGGAGCGC ACGATCTGGG AGGTGTTCGA AACAGAGAAA
CCCCACCTGG TCAGCTATCC CGGCAAGTTC GATGGTTTCC ATGCCGTGCA GGCCTCGATC
GGCAAGACCT GCCTCGTGCG TTTCGACAAC AACAAATACT CGGTGCTGTC GACCGCGGTC
GGCCGCCCGG CCGAGATACA TGCCTATGCC GATCGCATCG TCATCCGGCA AGATGGCGTC
GAGATCGGCC AGCACGACCG CTGCTTCGGC CGTGGCGAGA CGATCTATAA TCCATGGCAT
TACGTGCCGG TCCTGACCCG CAAGCCGGGA GCGCTGCGCA ACGGCGCGCC GTTCCACGAC
TGGGTTTTGC CTGCCGCCAT GGAGAAAGTG CGCCGCCGGC TGAAGGCCAT GCATGACGGT
GACCGCCAGA TGGTGTCAAT CCTCGAATGC GTCGGCCTGG ACGGGCTCCC CGCCGTCGAG
GCGGCCTGCC AGGAGGCGCT CGATCAGGGC GTATTCTCGG CGGCCGTCAT CATCAACATC
CTGGCCCGCA ACCGTGACCC GCAGCCGGCC GCCATCCTTT CCATTCCCGA TGCGCTTCGC
CTGACCTATG AGCCTCTGGC CGATTGCGCC CGTTACGACA GCCTCAGGAG GGCAAGCTGA
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| Protein sequence | MLVVETIAKI RRLALVQGKS IKAICRELGI SRKVVRKVLR TDETEFKYER TRQPQPKLGP
WRDKLDQLLL NNEAKASRER LTLIRIFEDL RDLGYEGGYD TVRRYARTWA KERGAVTAQA
YVPLYYAPGE AYQFDWSHEI IVLNGVTTTV KVAHVRLCHS RMMYVRAYPR ETQEMVFDAH
DRAFAFFGGA CTRGIYDNMK TAVETVFVGK ERQYNRRFLQ MCSHYLIEPV ACTPASGWEK
GQVENQVNLV RERFFTPRLR FKSYDELNGW LLDKCISYAR AHKHVDQPER TIWEVFETEK
PHLVSYPGKF DGFHAVQASI GKTCLVRFDN NKYSVLSTAV GRPAEIHAYA DRIVIRQDGV
EIGQHDRCFG RGETIYNPWH YVPVLTRKPG ALRNGAPFHD WVLPAAMEKV RRRLKAMHDG
DRQMVSILEC VGLDGLPAVE AACQEALDQG VFSAAVIINI LARNRDPQPA AILSIPDALR
LTYEPLADCA RYDSLRRAS
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