| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6478 |
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| Symbol | |
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| ID | 5320781 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | - |
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| Start bp | 175249 |
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| End bp | 176012 |
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| Gene Length | 764 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640778037 |
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| Product | transposase |
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| Protein accession | YP_001314969 |
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| Protein GI | 150378375 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.525266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC GCCGCTACGA ACTCACCGAC CACGAATGGT CAATCCTGTC GCCGCTGTTG
CCCAACAAAC CGCGTGGTGT TCCCCGCGTC GATGATCGGC GGGTGCTGAA TGGCATCCTC
TGGCGGTTTC GGACAGGCTC GCCCTGGGCG GAAATCCCGG AGCGCTATGG TCCGCCGACC
ACCTGCTACA ACCGCTTCGT CCGCTGGCGG AAGGCCGGTG TCTGGGATCG GCTTCTTGAA
GCCGTTTCCG AGGCTTACGA TGGCGACATC GTCATGATCG ACTCAACCTG TGTCCGCGTT
CACCAGCACG CGGCCACGGG AAAAAGGGGG ATGGAGACGA TGGCGGCATG GGACGTTCCC
GTGGCGGGCT CACGAGCAAA ATCCACGCGC TCGTCGACGC CGAAGGTCGC CCCGTCAACC
TCCGTCTGAC CGGCGGGCAG ATCGCCGACT GCACCGAGGC CGACGCGCTG ACGGACGAGC
TCGGCGAGGG AGATATCCTG CTGGCTGACA AGGGCTACGA CAGTAATGCC ATCCGGGCCA
AGGTCGCCGA GCGAAAGGCC TGGGCCAACA TTCCGCCGAA GACCAACCGT AAGGGCTCAT
TCGTTTTCTC GCGCTGGGTC TATCGGCAGC GGAACCTCGT GGAGCGGTTC TTCAATAGGA
TCAAACAGTT CCGAGGCATC GCAACCCGCT ACGATAAGCA CCCGGAAAAC TACCTCGCCG
CCGTAAAGCT CGTCGCCGCG AGGATATGGT GTCAAAGTTT ATGA
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| Protein sequence | MTRRRYELTD HEWSILSPLL PNKPRGVPRV DDRRVLNGIL WRFRTGSPWA EIPERYGPPT
TCYNRFVRWR KAGVWDRLLE AVSEAYDGDI VMIDSTCVRV HQHAATGKKG DGDDGGMGRS
RGGLTSKIHA LVDAEGRPVN LRLTGGQIAD CTEADALTDE LGEGDILLAD KGYDSNAIRA
KVAERKAWAN IPPKTNRKGS FVFSRWVYRQ RNLVERFFNR IKQFRGIATR YDKHPENYLA
AVKLVAARIW CQSL
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