Gene Smed_6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6469 
Symbol 
ID5320772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp115207 
End bp115956 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content50% 
IMG OID640778029 
Producthypothetical protein 
Protein accessionYP_001314961 
Protein GI150378367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAA AGGTATTCTC ATTACGGGAA CGGTCCGATC TGATTCCCTC AGTTTTTTCA 
CCGAAATTCG ATGGTCTTTG GCCCAACTTC ATGCGCCAAA ATCAAACTGC AAAGCTGTAT
TTTGGGAAGG CCGTGTTTTT TGACTACCTT GACTATGCCT TTGTAGGACT TATCGATGAG
GAGGTCGTTG CTCGAGCTTT CGGCGTGCCG TTTGCACTGA ACGTTGATGG GCGTGCCGAA
TTGCCTGACG GCGGTTGGGA CCAGGTTATC CGCTGGGCGC ATGAGGATAA ACTTATCGGT
CGCAAACCAA ACACGATGAG TGCACTCGAA ATCACATTAG CGCCCAAAGC ACGAGGTATT
GGCAATGCAC TGGCAATGTT GGGCGCATTA AAGACCTGTG CCAGGAATGC TGGCTTCGAC
GAATTGTCTG TGCCGGTTCG TCCAAATCAG AAGCAACGAG ACCCGCGGCT ACCTATGGAT
GAATACATCA AACTACAGCG TGCTGACGGC TCCCCGGTGG ATTCCTGGCT GCGAACTCAC
ATAGCCGTCG GTGGCAGAAT CTTAAAAATA GCACCTTATT CCATTACCAT TGCTGGGACA
ATTGCCGAAT GGTCAAGTTG GACAGGAATA GCGTTTGAAC GTTCGGGCAT GGTGGAAATT
GATGGTGCAC TGGTGCCGAT GCTTGTGTCG ATTGAGCACA ATTACGGCAT ATATGCCGAA
CCGAACGTAT GGATTCGACA TGCGCTATGA
 
Protein sequence
MSLKVFSLRE RSDLIPSVFS PKFDGLWPNF MRQNQTAKLY FGKAVFFDYL DYAFVGLIDE 
EVVARAFGVP FALNVDGRAE LPDGGWDQVI RWAHEDKLIG RKPNTMSALE ITLAPKARGI
GNALAMLGAL KTCARNAGFD ELSVPVRPNQ KQRDPRLPMD EYIKLQRADG SPVDSWLRTH
IAVGGRILKI APYSITIAGT IAEWSSWTGI AFERSGMVEI DGALVPMLVS IEHNYGIYAE
PNVWIRHAL