Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6460 |
Symbol | |
ID | 5320763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 106307 |
End bp | 106837 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640778023 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001314955 |
Protein GI | 150378361 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.556682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGCGG CGCCGGTGCG GGCGCGGCGC AAGCCGCGAG ACTGGCCGAA CGAGGAGAAG GAGCGCCTGA TTGCCGAGAC GTTGTTGCCT GGAGCCAATG TCTCTGCGAT CGCGCGCGCT GAGGGATTGG ATCCCTCGCA GCTTTACGGG TGGCGTCGCA AGGCACTGTC ATCGGGGTTG GTTGCGCCCC TGACGGAAAC CGCGAAGAAG GAGGTCAAGT TCGCGCGCGT TGAGCCGGTG GCAAGCTCTG CGGTCAAAAT CGTCCTCGGT GATGTCGTGG TGCGCGTCGG CGGCGACATC GAGTCGGATC ACCTGGCGAA GATACTCCGA GCGGCAAGGC ATGATCGCGT CCGGCGTTGT CGTTTACGTG TCGTGCCAGC CGGTCGACTT CCAAAAAGGT GCGGCATCCT TAATGGCTCT GGTCAGAGAT GGCGGTCTCG ACCCGTTCTT ATGCGTCGAG CGAGATTATG TGGCGGAGCC CGTCTCGGCG CCAGCCGAGG CCCGCCAAAT CTGGAATTCT CCGCCACATA A
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Protein sequence | MTAAPVRARR KPRDWPNEEK ERLIAETLLP GANVSAIARA EGLDPSQLYG WRRKALSSGL VAPLTETAKK EVKFARVEPV ASSAVKIVLG DVVVRVGGDI ESDHLAKILR AARHDRVRRC RLRVVPAGRL PKRCGILNGS GQRWRSRPVL MRRARLCGGA RLGASRGPPN LEFSAT
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