Gene Smed_6451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6451 
Symbol 
ID5320754 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp99230 
End bp100050 
Gene Length821 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID640778018 
Producthypothetical protein 
Protein accessionYP_001314950 
Protein GI150378356 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.335416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACGCG GCGACCTTTC GGATATGGAA TGGCGGATCA TCGAGGGGCT GCTGCCCACC 
GAACGCGGCA GGAAGTCTCG GCCCGCGCAT GACAATCGGC AATATCTGAA CGGCATGCTG
CATGTTCTTC GGGTCGGCTG CCCCTGGCGC GATATGCATG AGCGCTACGG AAAGTGGAAT
TCGGTCTATG TGCGCTTCCG CCGTTGGGCC GAGCAAGGCG TTTGGGATGC TCTCCTTGGG
ACCCTCGTCG AACTCGGGCT GACGGATGAC TGGCAGCACA TGATCGACAG CACCACGGTT
CGCGGCCACT CGCAGGCTGC GGGCGCAAAA GGGGGACTTA TCAGGAGGCT TTTGGTCGAT
CACGCGGCGG CTTTACGACG AAAATCCACG CCCGCGCAGA CGGTCAAGGA CGCCCTCTCG
GCTTCATCCT GACCGGTGGC GAGGCTTCGG ATTACAATGC CGTTCCTGAT CTGCTGGCGA
TATCGGTCAG CAAACCGAGA TTGTTTCTGG CCGACAAAGG TTATGACGGC GACTTCCTGC
GTGAGGAACT GCTGATCCAC GGCATCAGGC CGGTCATTCC ACCAAAGGCC AACAGGAAGA
ACCCGCCTGC CTGCGACTTC CGGGCATACA AGGATCGAAA CCGCATCGAA CGGATGTTCA
ACCGCCTCAA ACAGTTCCGT CGCATTGCGA CCCGATACGA CAAGACCCGA AATCCTTCTC
AGCATTCCTC GCCCTGGCCG CCGCCAAGAT ATGGCTGCCA TACTTTGTCA ACGGGACCTA
GTGGTCCCAT AAATCCCACG ACACGATCTC TCACTTTTTG A
 
Protein sequence
MARGDLSDME WRIIEGLLPT ERGRKSRPAH DNRQYLNGML HVLRVGCPWR DMHERYGKWN 
SVYVRFRRWA EQGVWDALLG TLVELGLTDD WQHMIDSTTV RGHSQAAGAK RGTYQEAFGR
SRGGFTTKIH ARADGQGRPL GFILTGGEAS DYNAVPDLLA ISVSKPRLFL ADKGYDGDFL
REELLIHGIR PVIPPKANRK NPPACDFRAY KDRNRIERMF NRLKQFRRIA TRYDKTRNPS
QHSSPWPPPR YGCHTLSTGP SGPINPTTRS LTF