| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6447 |
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| Symbol | |
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| ID | 5320750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 96912 |
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| End bp | 98021 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640778014 |
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| Product | calcium/proton exchanger |
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| Protein accession | YP_001314946 |
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| Protein GI | 150378352 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.194017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.51142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATA GCACCTCCAC ACACGTGCCG CTATGGTCCT GGATCATTCC GCTCCTCGGT
GGCGTGATTG CGGCTCTCGC ACTAGCGCAC CTGCTGCCCG CAGGCTCTGT CCTGATACGG
CTGACGTCGG CGGCCCTGCT TGCAGGTGCT GTTTTTGCAG CGGTGCATCA CGCCGAAGTT
CTTGCCGAGC GGGTGGGTGA GCCTTTTGGA GCGATCCTCC TCGCTATCTG CGTGACAATC
ATCGAAGTGG CGGTCATCGT CTCCATAATG TTATCCGGCG CAGAGGGAAA CGAAGAGGTC
GCGAGAGATA CGGTTTTTTC CGCGTTGATG ATTGTGCTCA ACGGAGTCAT CGGACTTTGT
CTAGTGGTTG GCGGCCGACG CCACCACGAG CAGTCGTTTC AGTTGAATGC GGCCTCGGCG
GCACTGGCAG TGCTTGGCAC ACTCGCGACG CTGTCTCTCG TGCTGCCGAA TTTCGTCATC
GCGGGACAGC CCCAGCAGTT CGCTCGAATA CAGCTTGCCA TCATTGGACT TGTGTCGCTG
GTCCTCTACG GCGTGTTTCT ATACGTGCAG ACGGTCCGCC ATCGCGACTA TTTCATGGAT
CACACGGGTG CCATCGATGA CGGCAAGGCG CTTCCGGCCG AGCATGAACG CCCGAAGGGC
AATATGCCGG TAACTGGAGG CCTGCTCGTG CTGGCCCTCG TGGCAGTCGT TTTGTTGGCC
AAGCTGCTTT CTCATCCCCT CGACAGCGCA GTCGACGCGG TCGGGCTGCC ACAAGCCGTG
GTTGGCGTGG TCATCGCGGG TGTCGTTCTC CTGCCGGAGG GCATAGCCTC GATCAAAGCA
GCATTGCTGA ACCGCCTTCA AAACAGCGTA AATCTTGTTC TCGGGTCAGC CCTTGCAAGC
ATAGGTATGA CAGTTCCGGT GGTCGCTGCG ATCTCCGTCA CACTCGGGCA GAACATTACG
TTGGGGCTCC GCCCGGAGAA CCTCGTAATG CTCGTCCTGA CACTCTTTGT CAGCACGATC
ACCCTCGGCA CCGGCAGAAC CACCGTGCTC CAAGGTGCCG TTCACCTCTC GATATTTGTT
GTTTTTCTCC TGCTTTCCGC CGTGCCCTAA
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| Protein sequence | MHDSTSTHVP LWSWIIPLLG GVIAALALAH LLPAGSVLIR LTSAALLAGA VFAAVHHAEV
LAERVGEPFG AILLAICVTI IEVAVIVSIM LSGAEGNEEV ARDTVFSALM IVLNGVIGLC
LVVGGRRHHE QSFQLNAASA ALAVLGTLAT LSLVLPNFVI AGQPQQFARI QLAIIGLVSL
VLYGVFLYVQ TVRHRDYFMD HTGAIDDGKA LPAEHERPKG NMPVTGGLLV LALVAVVLLA
KLLSHPLDSA VDAVGLPQAV VGVVIAGVVL LPEGIASIKA ALLNRLQNSV NLVLGSALAS
IGMTVPVVAA ISVTLGQNIT LGLRPENLVM LVLTLFVSTI TLGTGRTTVL QGAVHLSIFV
VFLLLSAVP
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