Gene Smed_6366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6366 
Symbol 
ID5320669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp30561 
End bp31043 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID640777957 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314889 
Protein GI150378295 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGAG ATCGCGCTGG TGCCATGCTT GGAGTCATGC ATGAAGCCAT GGATGAAGCC 
ATGGATGAAG CCAGGCATGA TGGAGCCTAC CGGCGGATCG AGCTGATCAC CGGGCGACGC
CAGCGGCGGA ATTGGACCGA CGAGGAGAAG GCGCGGATCC TTGCGGAGAG CGCTGAACCC
GGAGTGAACA TCTCGGCTGT TGCCCGGCGT TGGGGCGTCA ATCGCGGCTT GCTGAATGTC
TGGCGCCGCG AAGCCGGGCT GACCTCTCGA CGATCAGAGC AAGCCTGCGC ACAGCAGGCG
ATGTTCGTGC CGGTGACAGT GGTTGGAGAA CGAACGCTTC ACCAGAGCGC GTCGTCGGAT
ATCGCTTCCG TCGCTTCCGG TCGAATTGAG ATCGAGATTG CCGGGGCGCG CATGACCGTG
ATCGGCTCGG TGGCGCCCGA GTTGGCGCAG GCGATGGTGG CGGCGTTGCG AGGACGCCGG
TGA
 
Protein sequence
MVGDRAGAML GVMHEAMDEA MDEARHDGAY RRIELITGRR QRRNWTDEEK ARILAESAEP 
GVNISAVARR WGVNRGLLNV WRREAGLTSR RSEQACAQQA MFVPVTVVGE RTLHQSASSD
IASVASGRIE IEIAGARMTV IGSVAPELAQ AMVAALRGRR