Gene Smed_6342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6342 
Symbol 
ID5320645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp10537 
End bp11547 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID640777936 
ProductCheB methylesterase 
Protein accessionYP_001314868 
Protein GI150378274 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.582664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT CTGAAAAACC GCGATCTCCA GCCGGGATTT CGTTGCTGGC GCAGGGCGGC 
GCTTCACCCT ATGATGTGCT GTTGTCTCAT CGACGCGCAG GAAACATGAC GAAAGTGTCC
TATCTCGGCA AATTCCCCAT CGTCGGAATA GGGGCATCGG CGGGGGGGAT TCCGGCCATG
GAAGGCTTCT TCCGGGGTTT GCCGGCACGG CCGCATATGG CTTTCGTCAT CGTGACCCAT
CTCAATCCCG CACGGCAGAG CCTGCTTGAC GAGGTGGTGA GCCGCTACAC GGAAATGCCG
GTCCTCGTCG CCGAAGACGG GATGCCGACC GAGCCAAACC ACGTCTACGT GATGCCGGCG
AACGCGATCC TAACCATCAA GGAGGGGCGT CTTCAAATTC GACGTCCAGA CGCCGCGAAT
CGTGAACGCA AGCCGATCGA CATCTTTCTT GGGGCACTTG CCGAAGATCA GGACGAGCAC
GCCGTTGGCG TCATACTTTC CGGCGGTGAC GGCGATGGGA CGCTGGGCGC GAAGGCCATC
AAGGAGAGAG GCGGTCTGAC GCTTGCCCAG GTGAGCGACG GTTCAGGTCC TCGCAACCCA
GATATGCCAC AAAGCGCCAT CTCCAGCGGA ATGATCGATC TTGCGCTGCC GGCCGATCGG
ATGGGCGAGC GACTGGTTGC TTTCGCACGA GCTTTCAGGG TGCCTTTGGA GGAGACAAAG
AACGGTGCAG CAGATGATCG GTTGGAAGCA GACCTGCAGC GGGCACGGGT CGAGATATGT
GCATTGCTGC GAAGCCATTC CGGCCACGAT TTCTCCGGCT ATAAATCGAA GACATTCATA
AGGCGCGTCA AGCGCCACAT GCAAATCCTG CAGATGCCAT CCGTCGAGAG CTACATCGGC
CTACTGCAGC GCGACGCCAA CGAAGTGACG GCCCTCTTTC GCGATCTGCT GATCAATGTC
ACTAACTTCT TTCGCGACAC CGATCATTCA CGGCTCTGGA GAACCTTGTA G
 
Protein sequence
MSFSEKPRSP AGISLLAQGG ASPYDVLLSH RRAGNMTKVS YLGKFPIVGI GASAGGIPAM 
EGFFRGLPAR PHMAFVIVTH LNPARQSLLD EVVSRYTEMP VLVAEDGMPT EPNHVYVMPA
NAILTIKEGR LQIRRPDAAN RERKPIDIFL GALAEDQDEH AVGVILSGGD GDGTLGAKAI
KERGGLTLAQ VSDGSGPRNP DMPQSAISSG MIDLALPADR MGERLVAFAR AFRVPLEETK
NGAADDRLEA DLQRARVEIC ALLRSHSGHD FSGYKSKTFI RRVKRHMQIL QMPSVESYIG
LLQRDANEVT ALFRDLLINV TNFFRDTDHS RLWRTL