| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6315 |
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| Symbol | |
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| ID | 5320617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1230115 |
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| End bp | 1230882 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777913 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001314845 |
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| Protein GI | 150378250 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.24294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC CGATCTTCGA CCTTTCCGGC CGCCGCGCCC TCGTCACCGG AGCAAGCCGC
GGCATTGGAC AGTCTATCGC TTTGGCTCTG GCCGAGGCCG GGGCGGACGT GGCCGTGACG
GCGCGAACGA TCGATGGCCT GGAAGAGACC AGGGCTTTGA TCGAAAAGGT CGGAAGGCGC
GCGGTGGCGT TTGCCCAGGA TGTGCGCGAT GTCGGGGCTT GCGGAAGTGT GACGGGAGCG
GCGGCCGAGC GCTTGGGCGG CCTTGATATT CTCGTCAACA ACGCCGGCTT CGAGAACGTC
AGACCGTCCT TCGACGTAGA CGAGGCGCTC TGGGAAACGA TCATTTCGAC CAATCTGAAA
GGCGCCTTCT TCTGTGCGCA GGCGGCAGGC CGGATCATGG CGGAAGCGAA CGGCGGCGCG
ATCGTCAATC TCTGCTCGCT GACATCCTAT GTCGGCATTC CGACGGCAGC TCCCTACGGC
GCCTCGAAGT CCGGCCTGCT TGGAGTGACA CGGGCACTTG CAACGGAATG GGCAGCGCAC
AATATCCGCG TCAACGCAAT CGCTCCCGGC TATTTCCGCA CTGCCATGAC GGAGGTCTTC
TACGAGGACG AGGGCTGGCA ACAGCAGATG CTGGGGAAAA TCCCGCAACG GCGGTTCGGC
AAGGAAAGCG ATATCGGCGG CGTCGCGGTT TTCCTCTGCG GCGATGCGGC GGCCTATGTC
ACGGGGCATT GCATTCCGGT CGACGGCGGC TATCTCGCCT CGATCTGA
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| Protein sequence | MTHPIFDLSG RRALVTGASR GIGQSIALAL AEAGADVAVT ARTIDGLEET RALIEKVGRR
AVAFAQDVRD VGACGSVTGA AAERLGGLDI LVNNAGFENV RPSFDVDEAL WETIISTNLK
GAFFCAQAAG RIMAEANGGA IVNLCSLTSY VGIPTAAPYG ASKSGLLGVT RALATEWAAH
NIRVNAIAPG YFRTAMTEVF YEDEGWQQQM LGKIPQRRFG KESDIGGVAV FLCGDAAAYV
TGHCIPVDGG YLASI
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