| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6286 |
|---|
| Symbol | |
|---|
| ID | 5320588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 1205013 |
|---|
| End bp | 1206908 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640777885 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001314817 |
|---|
| Protein GI | 150378222 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4548] Nitric oxide reductase activation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.735218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGACT TCCTCGAGCT CGAAGAAACG GTCGGCCGCG CCTGGCATCG CTTGATCGGC
AACACGCGCA CTTGGCCGCG CTTTCCGGAC GAGGCGGTCC GGCTCGGGGA GGTCCAGGCC
GTGTTTGCCG TGTACTTCCG CGGTCTTGGC GGCGAGCGGG CGGTGCAGAT CGCGCCCGCC
CGCGGTCGAA CCTCCGCGCA CCGGCTGCGC TTGCGCCAGC GCATGGGCCT TGGCGAGGAG
AAGCTCGTCC AGCCGGCGCG CGACCATGCG ACGCTGATGC TGCCGGCAGA GGTCGATCTC
TTTCCCTCTC GGCGTCTCAA CCGCGACCTG TATTTCTGGC TGGCGGCGAT GATGGCCGTC
ATGCCACTCA AGCACGTCGG CGCCGCCGAC CCGCTATCGC GCGACTTGGC ACTCCTTTCA
CGTGCCGGTG ATACGGTAAG GTCGGTGCTC GCCAGCTATC CAGCAATGCG CCAACGCTAT
CGTCGCCTCT GCAGGGCGGT GCTCAACGTC CGGCAGCGGC GCTCGCTTCC TTCCGTCGAG
CAGCACGTCG AAAACCGGAC ACTCTCCATG CTAAGAGCCG GTGCCGGTCT CAACGACGAA
ATGCCGCCGG TCATCTTTCC AAGGTGTGCG CCAACCGGCT ATCTGCCGAT GCTTCCGGTA
CCGCTATGGC CAGACGTGCT CCTGCGTGAA GAGACGGAGC GGCGAAACGG CGAGGACGAG
CCCGCTCGCG GTGGCGATAG AGCGGAAGGG TCGGAGACGA CACGCCATGT GGCGACACGC
GAGGCACAGC GGCAGTCCGA GCGGAGCCCG TTCATCCTCA ACCGCTTCGA GAAGATCCTC
GCCATGGCCG AAATGGTCAA TGTCGACCGT CCGGCGGACG ACAGCGATGA CCACGACGCC
AGCGCCGCCG ACGAACTCGA CGACATGACG CTCGGCGAAC GCAAGGGACG CCCGGCCGCG
CGCTTTCGCT TCGACCTCGA CCTGCCCCCG GAAGCGCTGG ACCGCACGCC GCTCATGGCG
GAACTCACCT ATCCCGAATG GGACTATCGC GGCGGCGGCT ACCTCAAGGA CCATTGCCGG
GTGCTTGCCG CGCCCGCCTC GGCAGAAGGC CTGCCGGTAG AAGCGGATCC GACGACGAAG
AGCCTGATCC GGCGTGTGCG CCGTCAGTTC GAGGTACTGC GGCCGCGTCA CGAGATGCTG
AGGGCACAGA TCGATGGCGC CGACCTCGAT CTCGACGCGG TTGTGCGGGC GCGCACAGAC
CTCAGGGCCG GCGGGCAGGG CAGCGACCGC ATCCACATGA TGAGCCGGCC GCAGGCGCAC
GACCTTGCGG TGACGATCCT CATGGACGTG TCGCTCTCCA CCGACGCCTG GTTCGACGAT
CTTCGCGTCC TCGATGTCGA GAAGCAAGCG CTTCAGGTCC TGGCGCATGG GCTTTCCGCC
TGTGGCGATG CCCACGAAAT CCTCACCTTC ACGTCCCGGC GGCGAGATTG GGTGCGGATC
GAGACCGTGA AGGCTTTCGA CGAGGCGATG AGCGCGACGA TCGAGGCGCG CATCGCGGCG
CTGAAACCCG GCTACTACAC CCGCATGGGC GCGGCCATCC GCCACGCCGC AGCAAGGCTT
GTCGAACGGC CGAACCGCCG CAAGCTCCTC ATTGTCCTAA CCGACGGCAA GCCCAACGAC
GTCGACCACT ACGAGGGTCG TTTCGCGCTC GAGGACAGCC GCCGCGCCGT CGGTGAAACG
CGCCGCTCGG GCATCAGCGT CTTCGGGGTG ACGGTGGATC GCGAGGCGAA ATCCTATGTG
CCGGTCATAT TCGGCCAGAA CGGCTACGCC GTCGTCAGCA ATATCGGCAG GCTGCCTGCC
GCCCTGCCGG CGATCTATCG CGGCCTTGTA AGCTAG
|
|---|
| Protein sequence | MLDFLELEET VGRAWHRLIG NTRTWPRFPD EAVRLGEVQA VFAVYFRGLG GERAVQIAPA
RGRTSAHRLR LRQRMGLGEE KLVQPARDHA TLMLPAEVDL FPSRRLNRDL YFWLAAMMAV
MPLKHVGAAD PLSRDLALLS RAGDTVRSVL ASYPAMRQRY RRLCRAVLNV RQRRSLPSVE
QHVENRTLSM LRAGAGLNDE MPPVIFPRCA PTGYLPMLPV PLWPDVLLRE ETERRNGEDE
PARGGDRAEG SETTRHVATR EAQRQSERSP FILNRFEKIL AMAEMVNVDR PADDSDDHDA
SAADELDDMT LGERKGRPAA RFRFDLDLPP EALDRTPLMA ELTYPEWDYR GGGYLKDHCR
VLAAPASAEG LPVEADPTTK SLIRRVRRQF EVLRPRHEML RAQIDGADLD LDAVVRARTD
LRAGGQGSDR IHMMSRPQAH DLAVTILMDV SLSTDAWFDD LRVLDVEKQA LQVLAHGLSA
CGDAHEILTF TSRRRDWVRI ETVKAFDEAM SATIEARIAA LKPGYYTRMG AAIRHAAARL
VERPNRRKLL IVLTDGKPND VDHYEGRFAL EDSRRAVGET RRSGISVFGV TVDREAKSYV
PVIFGQNGYA VVSNIGRLPA ALPAIYRGLV S
|
|---|
| |