| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6274 |
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| Symbol | |
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| ID | 5320576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1192563 |
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| End bp | 1194167 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777873 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001314805 |
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| Protein GI | 150378210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.311499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTATG GGATAGCCGA GATGCGGTGG GCCGTATCCG ACGCTGGGTG CAGCAGTAAT
ACATCATCGT CTCCGGTGGA TAACGGAATG CATGCAGAAA GCGTTGTTGA GAGGACGAGG
CTCGGGCAGA AGCTCGTCCG GTGGCGAGGC GACGGGATCT CGGCCTATGT TCTCGGGACT
GTAGCTGTCT TAAACATTCT TGCCATTAGA CTCGCATTTC GGGAACTCTT CGGCGACAGC
TTTCTGCTCT TGTCGCTTAC CCCTGCCGTT CTCGTGGTCG CGATGGTCGG CGGGCTGAAA
CCGATCACCT TCGCAGCAGG GCTTTCGCTT CTTGCAGCAT CATCTCTTCG TTGGATAGAG
AACCCGTTCG AGCCGACAAT CGGCGAGCTG ATCGCCTTCG GCTCGACACT GCTCCTGATC
GTGGCTCTGG GAGAAGTGCT TCAGGCGGCA AGACGCGCCA TCGACCGGAC CGAGGGTGTC
GTAAGAGCCC GCGACGCGCA TCTGAGATCC ATACTGGATA CTGTTCCGGA TGCCACAGTG
GTCAGCGCTA CCGACGGCAC AATCGTATCC TTCAACGCCG CGGCCGTCCG GCAGTTCGGA
TACGCTGAGG AGGAGGTCAT CGGCCAGAAC CTGCGCATAT TGATGCCGGA ACCCTACCGC
CACGAACACG ACGGATATCT GCAGCGCTAC ATGGCAACCG GGGAAAAGCG CATCATCGGT
ATCGATCGCG TTGTCTCGGG GCAGCGGAAG GATGGATCGA CGTTTCCGAT GAAGCTCGCC
GTGGGGGAGA TGCGCTCGGG CGGCGAGAGG TTCTTCACAG GCTTCATCAG AGACCTTACG
GAGCGGGAGG AGTCTGCCGC ACGGCTCGAG CAGATACAGG ATGAACTGGC GCGCCTTGCC
CGCCTAAACG AGATGGGCGA AATGGCTTCG ACGCTTGCCC ACGAACTGAA CCAGCCGTTG
TCGGCGATCG CCAACTATTC GCATGGCTGT ACGAGGCTGT TGCGTGACAT GGACGACGCC
GTCGCTACGC GAATGCGAGA GGCGCTCGAA GAGGTGGCGA GCCAGTCGCT GCGGGCCGGC
CAGATCATCA AACATCTGAG GGAATTCGTC ACCAACGGCG AGACGGAGAA GGCTCCGGAA
GACATTCGCA AGCTGGTCGG GGAGTCTGCG GCCCTGGCTC TGGTCGGTTC GCGCGAGCAG
GGCGTCCGCA CCGTATTCGA GTATCTGCCC GATGCCGAAA TGGTAATGGT CGACCGGATC
CAGGTGCAGC AGGTCCTCAT CAATCTGATG CGCAACGCGA TAGAGGCGAT GCGCCACGTC
GACCGCCGGG AGCTGACGAT CCGCACGATG CCGGCCGATC CGGGCGAGAT AGCAGTCGTC
GTTGAAGACT CCGGCGGAGG CATTCCGGAA GAAGTCGCCG GTCAGCTCTT CAAGCCGTTC
GTCACGACCA AGGCAAGCGG AATGGGCATC GGACTGTCCA TTTCGAAGCG GATCGTCGAG
GCGCATGGCG GTGAGATGAC TGTCTCGAAA AATGCAGCCG GCGGGGCCAC TTTCCGGTTC
ACGCTTCCCG CCTATCTAGA AGAACGGATC GTTGCAAATG ACTGA
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| Protein sequence | MVYGIAEMRW AVSDAGCSSN TSSSPVDNGM HAESVVERTR LGQKLVRWRG DGISAYVLGT
VAVLNILAIR LAFRELFGDS FLLLSLTPAV LVVAMVGGLK PITFAAGLSL LAASSLRWIE
NPFEPTIGEL IAFGSTLLLI VALGEVLQAA RRAIDRTEGV VRARDAHLRS ILDTVPDATV
VSATDGTIVS FNAAAVRQFG YAEEEVIGQN LRILMPEPYR HEHDGYLQRY MATGEKRIIG
IDRVVSGQRK DGSTFPMKLA VGEMRSGGER FFTGFIRDLT EREESAARLE QIQDELARLA
RLNEMGEMAS TLAHELNQPL SAIANYSHGC TRLLRDMDDA VATRMREALE EVASQSLRAG
QIIKHLREFV TNGETEKAPE DIRKLVGESA ALALVGSREQ GVRTVFEYLP DAEMVMVDRI
QVQQVLINLM RNAIEAMRHV DRRELTIRTM PADPGEIAVV VEDSGGGIPE EVAGQLFKPF
VTTKASGMGI GLSISKRIVE AHGGEMTVSK NAAGGATFRF TLPAYLEERI VAND
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