Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6257 |
Symbol | |
ID | 5320559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1176339 |
End bp | 1177034 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777857 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001314789 |
Protein GI | 150378194 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.648776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0618122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATG CACTGGCAGG GAATGCCATT CGGGTAGAGC GTCCGACAAA AACATTGAGG GAACTGGCGC TCGACAAGGT GCGGGACGCT ATTGTCGACG GTTATTTCAG ACCGGGTGAT CGCCTTGTCG AGCGCGATCT GTGTGCGCGA CTCGGTGTCA GTCGTACAAT CGTCCGTGAG GTGCTGCGGC ACCTCGAATC CGAGGGCCTC GTCGCGAACT TGCCTAACAA AGGGCCGATC GTCGCGCGTC TAGATCTGAA TGAAGCGAAG CAGATCTACG AAATTCGCGG CGCCCTCGAA GGGATGGTCG CCCGACTTTG TGCGGAGCGA AACGACTCGA CCGTTGTTGC AGCCCTTGAA GCGTCCTTGG AAGGCATCCG CCAGAGCTAT GCTGCTAAGG ATATGCCCGC GGTTCTCAAT CACACTTCCG CATTCTACCA GACGCTTTTT ACCAAGGTCG ATCGCCACGT TGCCTGGGGC GTCGTCAGCC TGCTGACCGT CCGGATCAAC CATCTTCGTT CCATGACGAT CAAGACTAGA AATCGAGACG TCGAAGGACC GGCACAGATG GAAAGGATCG TTGAGGCCAT CCGAAAAGGC GACGGCGAAG CGGCTTACAC GGCTGCCCTT GATCATGTCG CCAGAGCTTC CGTCATCGCG GAGGCCGTAC TCTCAGCGCA GCAGACGGGC GACTGA
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Protein sequence | MNDALAGNAI RVERPTKTLR ELALDKVRDA IVDGYFRPGD RLVERDLCAR LGVSRTIVRE VLRHLESEGL VANLPNKGPI VARLDLNEAK QIYEIRGALE GMVARLCAER NDSTVVAALE ASLEGIRQSY AAKDMPAVLN HTSAFYQTLF TKVDRHVAWG VVSLLTVRIN HLRSMTIKTR NRDVEGPAQM ERIVEAIRKG DGEAAYTAAL DHVARASVIA EAVLSAQQTG D
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